Gene : AL1G26140 A. lyrata v2.1

Defline:  (1 of 2) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Genomic Order:  1535
Name:  ? AL1G26140 Secondary Identifier:  ? PAC:35934925

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G26140 0.5kb upstream 0.5kb upstream 2508   true scaffold_1: 5997747-6000254 Arabidopsis lyrata
AL1G26140 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 5997747-5998246 Arabidopsis lyrata
AL1G26140 0.5kb downstream 0.5kb downstream 2508   true scaffold_1: 5998247-6000754 Arabidopsis lyrata
AL1G26140 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 6000255-6000754 Arabidopsis lyrata
AL1G26140 1.0kb upstream 1.0kb upstream 3008   true scaffold_1: 5997247-6000254 Arabidopsis lyrata
AL1G26140 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 5997247-5998246 Arabidopsis lyrata
AL1G26140 1.0kb downstream 1.0kb downstream 3008   true scaffold_1: 5998247-6001254 Arabidopsis lyrata
AL1G26140 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 6000255-6001254 Arabidopsis lyrata
AL1G26140 2.0kb upstream 2.0kb upstream 4008   true scaffold_1: 5996247-6000254 Arabidopsis lyrata
AL1G26140 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 5996247-5998246 Arabidopsis lyrata
AL1G26140 2.0kb downstream 2.0kb downstream 4008   true scaffold_1: 5998247-6002254 Arabidopsis lyrata
AL1G26140 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 6000255-6002254 Arabidopsis lyrata
AL1G26140 5.0kb upstream 5.0kb upstream 7008   true scaffold_1: 5993247-6000254 Arabidopsis lyrata
AL1G26140 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 5993247-5998246 Arabidopsis lyrata
AL1G26140 5.0kb downstream 5.0kb downstream 7008   true scaffold_1: 5998247-6005254 Arabidopsis lyrata
AL1G26140 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 6000255-6005254 Arabidopsis lyrata
AL1G26140 10.0kb upstream 10.0kb upstream 12008   true scaffold_1: 5988247-6000254 Arabidopsis lyrata
AL1G26140 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 5988247-5998246 Arabidopsis lyrata
AL1G26140 10.0kb downstream 10.0kb downstream 12008   true scaffold_1: 5998247-6010254 Arabidopsis lyrata
AL1G26140 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 6000255-6010254 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510382 5273 Angiosperm View MSA
122362957 5261 Brassicaceae View MSA
123798458 5264 Brassicales-Malvales View MSA
124296090 5266 SBM View MSA
124148347 5268 Malvidae View MSA
123874359 5270 Rosid View MSA
123458348 5271 Pentapetalae View MSA
122493754 5272 Eudicot View MSA
120783484 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain