Gene : AL1G24992 A. lyrata v2.1

Defline:  (1 of 4) 5.3.99.6 - Allene-oxide cyclase Genomic Order:  1425
Name:  ? AL1G24992 Secondary Identifier:  ? PAC:35934579

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-735 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G24992 0.5kb upstream 0.5kb upstream 1490   true scaffold_1: 5538384-5539873 Arabidopsis lyrata
AL1G24992 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 5538384-5538883 Arabidopsis lyrata
AL1G24992 0.5kb downstream 0.5kb downstream 1490   true scaffold_1: 5538884-5540373 Arabidopsis lyrata
AL1G24992 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 5539874-5540373 Arabidopsis lyrata
AL1G24992 1.0kb upstream 1.0kb upstream 1990   true scaffold_1: 5537884-5539873 Arabidopsis lyrata
AL1G24992 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 5537884-5538883 Arabidopsis lyrata
AL1G24992 1.0kb downstream 1.0kb downstream 1990   true scaffold_1: 5538884-5540873 Arabidopsis lyrata
AL1G24992 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 5539874-5540873 Arabidopsis lyrata
AL1G24992 2.0kb upstream 2.0kb upstream 2990   true scaffold_1: 5536884-5539873 Arabidopsis lyrata
AL1G24992 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 5536884-5538883 Arabidopsis lyrata
AL1G24992 2.0kb downstream 2.0kb downstream 2990   true scaffold_1: 5538884-5541873 Arabidopsis lyrata
AL1G24992 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 5539874-5541873 Arabidopsis lyrata
AL1G24992 5.0kb upstream 5.0kb upstream 5990   true scaffold_1: 5533884-5539873 Arabidopsis lyrata
AL1G24992 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 5533884-5538883 Arabidopsis lyrata
AL1G24992 5.0kb downstream 5.0kb downstream 5990   true scaffold_1: 5538884-5544873 Arabidopsis lyrata
AL1G24992 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 5539874-5544873 Arabidopsis lyrata
AL1G24992 10.0kb upstream 10.0kb upstream 10990   true scaffold_1: 5528884-5539873 Arabidopsis lyrata
AL1G24992 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 5528884-5538883 Arabidopsis lyrata
AL1G24992 10.0kb downstream 10.0kb downstream 10990   true scaffold_1: 5538884-5549873 Arabidopsis lyrata
AL1G24992 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 5539874-5549873 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380510 5261 Brassicaceae View MSA
123828498 5264 Brassicales-Malvales View MSA
124339249 5266 SBM View MSA
124252758 5268 Malvidae View MSA
124066771 5270 Rosid View MSA
123739753 5271 Pentapetalae View MSA
122789032 5272 Eudicot View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain