Gene : AL1G25800 A. lyrata v2.1

Defline:  (1 of 3) PTHR31221:SF22 - WRKY TRANSCRIPTION FACTOR 3-RELATED Genomic Order:  1503
Name:  ? AL1G25800 Secondary Identifier:  ? PAC:35931948

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G25800 0.5kb upstream 0.5kb upstream 3692   true scaffold_1: 5858254-5861945 Arabidopsis lyrata
AL1G25800 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 5858254-5858753 Arabidopsis lyrata
AL1G25800 0.5kb downstream 0.5kb downstream 3692   true scaffold_1: 5858754-5862445 Arabidopsis lyrata
AL1G25800 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 5861946-5862445 Arabidopsis lyrata
AL1G25800 1.0kb upstream 1.0kb upstream 4192   true scaffold_1: 5857754-5861945 Arabidopsis lyrata
AL1G25800 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 5857754-5858753 Arabidopsis lyrata
AL1G25800 1.0kb downstream 1.0kb downstream 4192   true scaffold_1: 5858754-5862945 Arabidopsis lyrata
AL1G25800 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 5861946-5862945 Arabidopsis lyrata
AL1G25800 2.0kb upstream 2.0kb upstream 5192   true scaffold_1: 5856754-5861945 Arabidopsis lyrata
AL1G25800 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 5856754-5858753 Arabidopsis lyrata
AL1G25800 2.0kb downstream 2.0kb downstream 5192   true scaffold_1: 5858754-5863945 Arabidopsis lyrata
AL1G25800 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 5861946-5863945 Arabidopsis lyrata
AL1G25800 5.0kb upstream 5.0kb upstream 8192   true scaffold_1: 5853754-5861945 Arabidopsis lyrata
AL1G25800 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 5853754-5858753 Arabidopsis lyrata
AL1G25800 5.0kb downstream 5.0kb downstream 8192   true scaffold_1: 5858754-5866945 Arabidopsis lyrata
AL1G25800 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 5861946-5866945 Arabidopsis lyrata
AL1G25800 10.0kb upstream 10.0kb upstream 13192   true scaffold_1: 5848754-5861945 Arabidopsis lyrata
AL1G25800 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 5848754-5858753 Arabidopsis lyrata
AL1G25800 10.0kb downstream 10.0kb downstream 13192   true scaffold_1: 5858754-5871945 Arabidopsis lyrata
AL1G25800 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 5861946-5871945 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370037 5261 Brassicaceae View MSA
123835692 5264 Brassicales-Malvales View MSA
124343983 5266 SBM View MSA
124253735 5268 Malvidae View MSA
124070868 5270 Rosid View MSA
123742422 5271 Pentapetalae View MSA
122788508 5272 Eudicot View MSA
122041677 5273 Angiosperm View MSA
121349380 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain