Gene : AL1G25720 A. lyrata v2.1

Defline:  (1 of 2) K18211 - synaptosomal-associated protein 25 (SNAP25) Genomic Order:  1495
Name:  ? AL1G25720 Secondary Identifier:  ? PAC:35931091

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G25720 0.5kb upstream 0.5kb upstream 2301   true scaffold_1: 5829114-5831414 Arabidopsis lyrata
AL1G25720 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 5829114-5829613 Arabidopsis lyrata
AL1G25720 0.5kb downstream 0.5kb downstream 2301   true scaffold_1: 5829614-5831914 Arabidopsis lyrata
AL1G25720 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 5831415-5831914 Arabidopsis lyrata
AL1G25720 1.0kb upstream 1.0kb upstream 2801   true scaffold_1: 5828614-5831414 Arabidopsis lyrata
AL1G25720 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 5828614-5829613 Arabidopsis lyrata
AL1G25720 1.0kb downstream 1.0kb downstream 2801   true scaffold_1: 5829614-5832414 Arabidopsis lyrata
AL1G25720 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 5831415-5832414 Arabidopsis lyrata
AL1G25720 2.0kb upstream 2.0kb upstream 3801   true scaffold_1: 5827614-5831414 Arabidopsis lyrata
AL1G25720 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 5827614-5829613 Arabidopsis lyrata
AL1G25720 2.0kb downstream 2.0kb downstream 3801   true scaffold_1: 5829614-5833414 Arabidopsis lyrata
AL1G25720 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 5831415-5833414 Arabidopsis lyrata
AL1G25720 5.0kb upstream 5.0kb upstream 6801   true scaffold_1: 5824614-5831414 Arabidopsis lyrata
AL1G25720 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 5824614-5829613 Arabidopsis lyrata
AL1G25720 5.0kb downstream 5.0kb downstream 6801   true scaffold_1: 5829614-5836414 Arabidopsis lyrata
AL1G25720 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 5831415-5836414 Arabidopsis lyrata
AL1G25720 10.0kb upstream 10.0kb upstream 11801   true scaffold_1: 5819614-5831414 Arabidopsis lyrata
AL1G25720 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 5819614-5829613 Arabidopsis lyrata
AL1G25720 10.0kb downstream 10.0kb downstream 11801   true scaffold_1: 5829614-5841414 Arabidopsis lyrata
AL1G25720 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 5831415-5841414 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366191 5261 Brassicaceae View MSA
123828329 5264 Brassicales-Malvales View MSA
124339659 5266 SBM View MSA
124241975 5268 Malvidae View MSA
124069233 5270 Rosid View MSA
123745951 5271 Pentapetalae View MSA
122796965 5272 Eudicot View MSA
122050570 5273 Angiosperm View MSA
121349451 5274 Embryophyte View MSA
123428314 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain