Gene : AL1G23360 A. lyrata v2.1

Defline:  (1 of 19) PF00234 - Protease inhibitor/seed storage/LTP family (Tryp_alpha_amyl) Genomic Order:  1271
Name:  ? AL1G23360 Secondary Identifier:  ? PAC:35930538

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G23360 0.5kb upstream 0.5kb upstream 1275   true scaffold_1: 4890099-4891373 Arabidopsis lyrata
AL1G23360 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 4890874-4891373 Arabidopsis lyrata
AL1G23360 0.5kb downstream 0.5kb downstream 1275   true scaffold_1: 4889599-4890873 Arabidopsis lyrata
AL1G23360 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 4889599-4890098 Arabidopsis lyrata
AL1G23360 1.0kb upstream 1.0kb upstream 1775   true scaffold_1: 4890099-4891873 Arabidopsis lyrata
AL1G23360 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 4890874-4891873 Arabidopsis lyrata
AL1G23360 1.0kb downstream 1.0kb downstream 1775   true scaffold_1: 4889099-4890873 Arabidopsis lyrata
AL1G23360 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 4889099-4890098 Arabidopsis lyrata
AL1G23360 2.0kb upstream 2.0kb upstream 2775   true scaffold_1: 4890099-4892873 Arabidopsis lyrata
AL1G23360 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 4890874-4892873 Arabidopsis lyrata
AL1G23360 2.0kb downstream 2.0kb downstream 2775   true scaffold_1: 4888099-4890873 Arabidopsis lyrata
AL1G23360 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 4888099-4890098 Arabidopsis lyrata
AL1G23360 5.0kb upstream 5.0kb upstream 5775   true scaffold_1: 4890099-4895873 Arabidopsis lyrata
AL1G23360 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 4890874-4895873 Arabidopsis lyrata
AL1G23360 5.0kb downstream 5.0kb downstream 5775   true scaffold_1: 4885099-4890873 Arabidopsis lyrata
AL1G23360 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 4885099-4890098 Arabidopsis lyrata
AL1G23360 10.0kb upstream 10.0kb upstream 10775   true scaffold_1: 4890099-4900873 Arabidopsis lyrata
AL1G23360 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 4890874-4900873 Arabidopsis lyrata
AL1G23360 10.0kb downstream 10.0kb downstream 10775   true scaffold_1: 4880099-4890873 Arabidopsis lyrata
AL1G23360 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 4880099-4890098 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379965 5261 Brassicaceae View MSA
123836715 5264 Brassicales-Malvales View MSA
124342159 5266 SBM View MSA
124253928 5268 Malvidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain