Gene : AL1G23030 A. lyrata v2.1

Defline:  (1 of 1) K00605 - aminomethyltransferase (gcvT, AMT) Genomic Order:  1239
Name:  ? AL1G23030 Secondary Identifier:  ? PAC:35931636

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLYCLEAV-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G23030 0.5kb upstream 0.5kb upstream 2589   true scaffold_1: 4756178-4758766 Arabidopsis lyrata
AL1G23030 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 4756178-4756677 Arabidopsis lyrata
AL1G23030 0.5kb downstream 0.5kb downstream 2589   true scaffold_1: 4756678-4759266 Arabidopsis lyrata
AL1G23030 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 4758767-4759266 Arabidopsis lyrata
AL1G23030 1.0kb upstream 1.0kb upstream 3089   true scaffold_1: 4755678-4758766 Arabidopsis lyrata
AL1G23030 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 4755678-4756677 Arabidopsis lyrata
AL1G23030 1.0kb downstream 1.0kb downstream 3089   true scaffold_1: 4756678-4759766 Arabidopsis lyrata
AL1G23030 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 4758767-4759766 Arabidopsis lyrata
AL1G23030 2.0kb upstream 2.0kb upstream 4089   true scaffold_1: 4754678-4758766 Arabidopsis lyrata
AL1G23030 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 4754678-4756677 Arabidopsis lyrata
AL1G23030 2.0kb downstream 2.0kb downstream 4089   true scaffold_1: 4756678-4760766 Arabidopsis lyrata
AL1G23030 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 4758767-4760766 Arabidopsis lyrata
AL1G23030 5.0kb upstream 5.0kb upstream 7089   true scaffold_1: 4751678-4758766 Arabidopsis lyrata
AL1G23030 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 4751678-4756677 Arabidopsis lyrata
AL1G23030 5.0kb downstream 5.0kb downstream 7089   true scaffold_1: 4756678-4763766 Arabidopsis lyrata
AL1G23030 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 4758767-4763766 Arabidopsis lyrata
AL1G23030 10.0kb upstream 10.0kb upstream 12089   true scaffold_1: 4746678-4758766 Arabidopsis lyrata
AL1G23030 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 4746678-4756677 Arabidopsis lyrata
AL1G23030 10.0kb downstream 10.0kb downstream 12089   true scaffold_1: 4756678-4768766 Arabidopsis lyrata
AL1G23030 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 4758767-4768766 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375304 5261 Brassicaceae View MSA
123834840 5264 Brassicales-Malvales View MSA
124337156 5266 SBM View MSA
124251126 5268 Malvidae View MSA
124063348 5270 Rosid View MSA
123743205 5271 Pentapetalae View MSA
122791059 5272 Eudicot View MSA
122045036 5273 Angiosperm View MSA
121345728 5274 Embryophyte View MSA
123424844 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain