Gene : AL1G22080 A. lyrata v2.1

Defline:  (1 of 2) PTHR10799:SF705 - SNF2 , HELICASE AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1148
Name:  ? AL1G22080 Secondary Identifier:  ? PAC:35931398

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G22080 0.5kb upstream 0.5kb upstream 6275   true scaffold_1: 4412963-4419237 Arabidopsis lyrata
AL1G22080 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 4418738-4419237 Arabidopsis lyrata
AL1G22080 0.5kb downstream 0.5kb downstream 6275   true scaffold_1: 4412463-4418737 Arabidopsis lyrata
AL1G22080 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 4412463-4412962 Arabidopsis lyrata
AL1G22080 1.0kb upstream 1.0kb upstream 6775   true scaffold_1: 4412963-4419737 Arabidopsis lyrata
AL1G22080 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 4418738-4419737 Arabidopsis lyrata
AL1G22080 1.0kb downstream 1.0kb downstream 6775   true scaffold_1: 4411963-4418737 Arabidopsis lyrata
AL1G22080 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 4411963-4412962 Arabidopsis lyrata
AL1G22080 2.0kb upstream 2.0kb upstream 7775   true scaffold_1: 4412963-4420737 Arabidopsis lyrata
AL1G22080 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 4418738-4420737 Arabidopsis lyrata
AL1G22080 2.0kb downstream 2.0kb downstream 7775   true scaffold_1: 4410963-4418737 Arabidopsis lyrata
AL1G22080 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 4410963-4412962 Arabidopsis lyrata
AL1G22080 5.0kb upstream 5.0kb upstream 10775   true scaffold_1: 4412963-4423737 Arabidopsis lyrata
AL1G22080 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 4418738-4423737 Arabidopsis lyrata
AL1G22080 5.0kb downstream 5.0kb downstream 10775   true scaffold_1: 4407963-4418737 Arabidopsis lyrata
AL1G22080 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 4407963-4412962 Arabidopsis lyrata
AL1G22080 10.0kb upstream 10.0kb upstream 15775   true scaffold_1: 4412963-4428737 Arabidopsis lyrata
AL1G22080 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 4418738-4428737 Arabidopsis lyrata
AL1G22080 10.0kb downstream 10.0kb downstream 15775   true scaffold_1: 4402963-4418737 Arabidopsis lyrata
AL1G22080 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 4402963-4412962 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343234 5261 Brassicaceae View MSA
123783492 5264 Brassicales-Malvales View MSA
124281723 5266 SBM View MSA
124136433 5268 Malvidae View MSA
124061950 5270 Rosid View MSA
123743862 5271 Pentapetalae View MSA
122797067 5272 Eudicot View MSA
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain