Gene : AL1G21770 A. lyrata v2.1

Defline:  (1 of 1) PTHR11946//PTHR11946:SF78 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // SUBFAMILY NOT NAMED Genomic Order:  1123
Name:  ? AL1G21770 Secondary Identifier:  ? PAC:35935497

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata TRNA-CHARGING-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G21770 0.5kb upstream 0.5kb upstream 3964   true scaffold_1: 4293687-4297650 Arabidopsis lyrata
AL1G21770 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 4297151-4297650 Arabidopsis lyrata
AL1G21770 0.5kb downstream 0.5kb downstream 3964   true scaffold_1: 4293187-4297150 Arabidopsis lyrata
AL1G21770 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 4293187-4293686 Arabidopsis lyrata
AL1G21770 1.0kb upstream 1.0kb upstream 4464   true scaffold_1: 4293687-4298150 Arabidopsis lyrata
AL1G21770 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 4297151-4298150 Arabidopsis lyrata
AL1G21770 1.0kb downstream 1.0kb downstream 4464   true scaffold_1: 4292687-4297150 Arabidopsis lyrata
AL1G21770 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 4292687-4293686 Arabidopsis lyrata
AL1G21770 2.0kb upstream 2.0kb upstream 5464   true scaffold_1: 4293687-4299150 Arabidopsis lyrata
AL1G21770 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 4297151-4299150 Arabidopsis lyrata
AL1G21770 2.0kb downstream 2.0kb downstream 5464   true scaffold_1: 4291687-4297150 Arabidopsis lyrata
AL1G21770 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 4291687-4293686 Arabidopsis lyrata
AL1G21770 5.0kb upstream 5.0kb upstream 8464   true scaffold_1: 4293687-4302150 Arabidopsis lyrata
AL1G21770 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 4297151-4302150 Arabidopsis lyrata
AL1G21770 5.0kb downstream 5.0kb downstream 8464   true scaffold_1: 4288687-4297150 Arabidopsis lyrata
AL1G21770 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 4288687-4293686 Arabidopsis lyrata
AL1G21770 10.0kb upstream 10.0kb upstream 13464   true scaffold_1: 4293687-4307150 Arabidopsis lyrata
AL1G21770 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 4297151-4307150 Arabidopsis lyrata
AL1G21770 10.0kb downstream 10.0kb downstream 13464   true scaffold_1: 4283687-4297150 Arabidopsis lyrata
AL1G21770 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 4283687-4293686 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029887 5273 Angiosperm View MSA
122328147 5261 Brassicaceae View MSA
123769526 5264 Brassicales-Malvales View MSA
124268085 5266 SBM View MSA
124124344 5268 Malvidae View MSA
123853396 5270 Rosid View MSA
123753825 5271 Pentapetalae View MSA
122775265 5272 Eudicot View MSA
121348816 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain