Gene : AL1G22970 A. lyrata v2.1

Defline:  (1 of 1) 1.14.11.33//4.2.99.18 - DNA oxidative demethylase / Alkylated DNA repair protein // DNA-(apurinic or apyrimidinic site) lyase / Phage-T4 UV endonuclease Genomic Order:  1233
Name:  ? AL1G22970 Secondary Identifier:  ? PAC:35935530

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G22970 0.5kb upstream 0.5kb upstream 2275   true scaffold_1: 4738029-4740303 Arabidopsis lyrata
AL1G22970 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 4739804-4740303 Arabidopsis lyrata
AL1G22970 0.5kb downstream 0.5kb downstream 2275   true scaffold_1: 4737529-4739803 Arabidopsis lyrata
AL1G22970 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 4737529-4738028 Arabidopsis lyrata
AL1G22970 1.0kb upstream 1.0kb upstream 2775   true scaffold_1: 4738029-4740803 Arabidopsis lyrata
AL1G22970 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 4739804-4740803 Arabidopsis lyrata
AL1G22970 1.0kb downstream 1.0kb downstream 2775   true scaffold_1: 4737029-4739803 Arabidopsis lyrata
AL1G22970 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 4737029-4738028 Arabidopsis lyrata
AL1G22970 2.0kb upstream 2.0kb upstream 3775   true scaffold_1: 4738029-4741803 Arabidopsis lyrata
AL1G22970 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 4739804-4741803 Arabidopsis lyrata
AL1G22970 2.0kb downstream 2.0kb downstream 3775   true scaffold_1: 4736029-4739803 Arabidopsis lyrata
AL1G22970 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 4736029-4738028 Arabidopsis lyrata
AL1G22970 5.0kb upstream 5.0kb upstream 6775   true scaffold_1: 4738029-4744803 Arabidopsis lyrata
AL1G22970 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 4739804-4744803 Arabidopsis lyrata
AL1G22970 5.0kb downstream 5.0kb downstream 6775   true scaffold_1: 4733029-4739803 Arabidopsis lyrata
AL1G22970 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 4733029-4738028 Arabidopsis lyrata
AL1G22970 10.0kb upstream 10.0kb upstream 11775   true scaffold_1: 4738029-4749803 Arabidopsis lyrata
AL1G22970 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 4739804-4749803 Arabidopsis lyrata
AL1G22970 10.0kb downstream 10.0kb downstream 11775   true scaffold_1: 4728029-4739803 Arabidopsis lyrata
AL1G22970 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 4728029-4738028 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372044 5261 Brassicaceae View MSA
123831243 5264 Brassicales-Malvales View MSA
124343538 5266 SBM View MSA
124237124 5268 Malvidae View MSA
124069027 5270 Rosid View MSA
123737272 5271 Pentapetalae View MSA
122785941 5272 Eudicot View MSA
122044879 5273 Angiosperm View MSA
121344923 5274 Embryophyte View MSA
123425704 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain