Gene : AL1G21570 A. lyrata v2.1

Defline:  (1 of 1) PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC Genomic Order:  1104
Name:  ? AL1G21570 Secondary Identifier:  ? PAC:35933157

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-662 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G21570 0.5kb upstream 0.5kb upstream 2974   true scaffold_1: 4203975-4206948 Arabidopsis lyrata
AL1G21570 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 4203975-4204474 Arabidopsis lyrata
AL1G21570 0.5kb downstream 0.5kb downstream 2974   true scaffold_1: 4204475-4207448 Arabidopsis lyrata
AL1G21570 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 4206949-4207448 Arabidopsis lyrata
AL1G21570 1.0kb upstream 1.0kb upstream 3474   true scaffold_1: 4203475-4206948 Arabidopsis lyrata
AL1G21570 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 4203475-4204474 Arabidopsis lyrata
AL1G21570 1.0kb downstream 1.0kb downstream 3474   true scaffold_1: 4204475-4207948 Arabidopsis lyrata
AL1G21570 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 4206949-4207948 Arabidopsis lyrata
AL1G21570 2.0kb upstream 2.0kb upstream 4474   true scaffold_1: 4202475-4206948 Arabidopsis lyrata
AL1G21570 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 4202475-4204474 Arabidopsis lyrata
AL1G21570 2.0kb downstream 2.0kb downstream 4474   true scaffold_1: 4204475-4208948 Arabidopsis lyrata
AL1G21570 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 4206949-4208948 Arabidopsis lyrata
AL1G21570 5.0kb upstream 5.0kb upstream 7474   true scaffold_1: 4199475-4206948 Arabidopsis lyrata
AL1G21570 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 4199475-4204474 Arabidopsis lyrata
AL1G21570 5.0kb downstream 5.0kb downstream 7474   true scaffold_1: 4204475-4211948 Arabidopsis lyrata
AL1G21570 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 4206949-4211948 Arabidopsis lyrata
AL1G21570 10.0kb upstream 10.0kb upstream 12474   true scaffold_1: 4194475-4206948 Arabidopsis lyrata
AL1G21570 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 4194475-4204474 Arabidopsis lyrata
AL1G21570 10.0kb downstream 10.0kb downstream 12474   true scaffold_1: 4204475-4216948 Arabidopsis lyrata
AL1G21570 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 4206949-4216948 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373386 5261 Brassicaceae View MSA
123833850 5264 Brassicales-Malvales View MSA
124338724 5266 SBM View MSA
124238778 5268 Malvidae View MSA
124068369 5270 Rosid View MSA
123738172 5271 Pentapetalae View MSA
122787555 5272 Eudicot View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain