Gene : AL1G21300 A. lyrata v2.1

Defline:  (1 of 1) PTHR10072:SF48 - IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC Genomic Order:  1077
Name:  ? AL1G21300 Secondary Identifier:  ? PAC:35932776

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G21300 0.5kb upstream 0.5kb upstream 1846   true scaffold_1: 4098537-4100382 Arabidopsis lyrata
AL1G21300 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 4099883-4100382 Arabidopsis lyrata
AL1G21300 0.5kb downstream 0.5kb downstream 1846   true scaffold_1: 4098037-4099882 Arabidopsis lyrata
AL1G21300 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 4098037-4098536 Arabidopsis lyrata
AL1G21300 1.0kb upstream 1.0kb upstream 2346   true scaffold_1: 4098537-4100882 Arabidopsis lyrata
AL1G21300 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 4099883-4100882 Arabidopsis lyrata
AL1G21300 1.0kb downstream 1.0kb downstream 2346   true scaffold_1: 4097537-4099882 Arabidopsis lyrata
AL1G21300 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 4097537-4098536 Arabidopsis lyrata
AL1G21300 2.0kb upstream 2.0kb upstream 3346   true scaffold_1: 4098537-4101882 Arabidopsis lyrata
AL1G21300 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 4099883-4101882 Arabidopsis lyrata
AL1G21300 2.0kb downstream 2.0kb downstream 3346   true scaffold_1: 4096537-4099882 Arabidopsis lyrata
AL1G21300 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 4096537-4098536 Arabidopsis lyrata
AL1G21300 5.0kb upstream 5.0kb upstream 6346   true scaffold_1: 4098537-4104882 Arabidopsis lyrata
AL1G21300 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 4099883-4104882 Arabidopsis lyrata
AL1G21300 5.0kb downstream 5.0kb downstream 6346   true scaffold_1: 4093537-4099882 Arabidopsis lyrata
AL1G21300 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 4093537-4098536 Arabidopsis lyrata
AL1G21300 10.0kb upstream 10.0kb upstream 11346   true scaffold_1: 4098537-4109882 Arabidopsis lyrata
AL1G21300 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 4099883-4109882 Arabidopsis lyrata
AL1G21300 10.0kb downstream 10.0kb downstream 11346   true scaffold_1: 4088537-4099882 Arabidopsis lyrata
AL1G21300 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 4088537-4098536 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367072 5261 Brassicaceae View MSA
123838817 5264 Brassicales-Malvales View MSA
124350235 5266 SBM View MSA
124238318 5268 Malvidae View MSA
124065003 5270 Rosid View MSA
123740000 5271 Pentapetalae View MSA
122792600 5272 Eudicot View MSA
122046362 5273 Angiosperm View MSA
121346119 5274 Embryophyte View MSA
123427871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain