Gene : AL1G19770 A. lyrata v2.1

Defline:  (1 of 1) PTHR22778:SF0 - OVARIAN CANCER-ASSOCIATED GENE 2 PROTEIN Genomic Order:  928
Name:  ? AL1G19770 Secondary Identifier:  ? PAC:35930584

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G19770 0.5kb upstream 0.5kb upstream 3820   true scaffold_1: 3549571-3553390 Arabidopsis lyrata
AL1G19770 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 3552891-3553390 Arabidopsis lyrata
AL1G19770 0.5kb downstream 0.5kb downstream 3820   true scaffold_1: 3549071-3552890 Arabidopsis lyrata
AL1G19770 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 3549071-3549570 Arabidopsis lyrata
AL1G19770 1.0kb upstream 1.0kb upstream 4320   true scaffold_1: 3549571-3553890 Arabidopsis lyrata
AL1G19770 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 3552891-3553890 Arabidopsis lyrata
AL1G19770 1.0kb downstream 1.0kb downstream 4320   true scaffold_1: 3548571-3552890 Arabidopsis lyrata
AL1G19770 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 3548571-3549570 Arabidopsis lyrata
AL1G19770 2.0kb upstream 2.0kb upstream 5320   true scaffold_1: 3549571-3554890 Arabidopsis lyrata
AL1G19770 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 3552891-3554890 Arabidopsis lyrata
AL1G19770 2.0kb downstream 2.0kb downstream 5320   true scaffold_1: 3547571-3552890 Arabidopsis lyrata
AL1G19770 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 3547571-3549570 Arabidopsis lyrata
AL1G19770 5.0kb upstream 5.0kb upstream 8320   true scaffold_1: 3549571-3557890 Arabidopsis lyrata
AL1G19770 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 3552891-3557890 Arabidopsis lyrata
AL1G19770 5.0kb downstream 5.0kb downstream 8320   true scaffold_1: 3544571-3552890 Arabidopsis lyrata
AL1G19770 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 3544571-3549570 Arabidopsis lyrata
AL1G19770 10.0kb upstream 10.0kb upstream 13320   true scaffold_1: 3549571-3562890 Arabidopsis lyrata
AL1G19770 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 3552891-3562890 Arabidopsis lyrata
AL1G19770 10.0kb downstream 10.0kb downstream 13320   true scaffold_1: 3539571-3552890 Arabidopsis lyrata
AL1G19770 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 3539571-3549570 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367971 5261 Brassicaceae View MSA
123834371 5264 Brassicales-Malvales View MSA
124344798 5266 SBM View MSA
124242223 5268 Malvidae View MSA
124063987 5270 Rosid View MSA
123748273 5271 Pentapetalae View MSA
122787224 5272 Eudicot View MSA
122041526 5273 Angiosperm View MSA
121343974 5274 Embryophyte View MSA
123427771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain