Gene : AL1G20370 A. lyrata v2.1

Defline:  (1 of 3) K00765 - ATP phosphoribosyltransferase (hisG) Genomic Order:  987
Name:  ? AL1G20370 Secondary Identifier:  ? PAC:35935438

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata HISTSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G20370 0.5kb upstream 0.5kb upstream 3580   true scaffold_1: 3726887-3730466 Arabidopsis lyrata
AL1G20370 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 3726887-3727386 Arabidopsis lyrata
AL1G20370 0.5kb downstream 0.5kb downstream 3580   true scaffold_1: 3727387-3730966 Arabidopsis lyrata
AL1G20370 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 3730467-3730966 Arabidopsis lyrata
AL1G20370 1.0kb upstream 1.0kb upstream 4080   true scaffold_1: 3726387-3730466 Arabidopsis lyrata
AL1G20370 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 3726387-3727386 Arabidopsis lyrata
AL1G20370 1.0kb downstream 1.0kb downstream 4080   true scaffold_1: 3727387-3731466 Arabidopsis lyrata
AL1G20370 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 3730467-3731466 Arabidopsis lyrata
AL1G20370 2.0kb upstream 2.0kb upstream 5080   true scaffold_1: 3725387-3730466 Arabidopsis lyrata
AL1G20370 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 3725387-3727386 Arabidopsis lyrata
AL1G20370 2.0kb downstream 2.0kb downstream 5080   true scaffold_1: 3727387-3732466 Arabidopsis lyrata
AL1G20370 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 3730467-3732466 Arabidopsis lyrata
AL1G20370 5.0kb upstream 5.0kb upstream 8080   true scaffold_1: 3722387-3730466 Arabidopsis lyrata
AL1G20370 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 3722387-3727386 Arabidopsis lyrata
AL1G20370 5.0kb downstream 5.0kb downstream 8080   true scaffold_1: 3727387-3735466 Arabidopsis lyrata
AL1G20370 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 3730467-3735466 Arabidopsis lyrata
AL1G20370 10.0kb upstream 10.0kb upstream 13080   true scaffold_1: 3717387-3730466 Arabidopsis lyrata
AL1G20370 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 3717387-3727386 Arabidopsis lyrata
AL1G20370 10.0kb downstream 10.0kb downstream 13080   true scaffold_1: 3727387-3740466 Arabidopsis lyrata
AL1G20370 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 3730467-3740466 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367089 5261 Brassicaceae View MSA
123840456 5264 Brassicales-Malvales View MSA
124322722 5266 SBM View MSA
124239271 5268 Malvidae View MSA
124065135 5270 Rosid View MSA
123747829 5271 Pentapetalae View MSA
122790103 5272 Eudicot View MSA
122042069 5273 Angiosperm View MSA
121345675 5274 Embryophyte View MSA
123427111 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain