Gene : AL1G20110 A. lyrata v2.1

Defline:  (1 of 2) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  961
Name:  ? AL1G20110 Secondary Identifier:  ? PAC:35935586

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G20110 0.5kb upstream 0.5kb upstream 2078   true scaffold_1: 3655265-3657342 Arabidopsis lyrata
AL1G20110 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 3655265-3655764 Arabidopsis lyrata
AL1G20110 0.5kb downstream 0.5kb downstream 2078   true scaffold_1: 3655765-3657842 Arabidopsis lyrata
AL1G20110 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 3657343-3657842 Arabidopsis lyrata
AL1G20110 1.0kb upstream 1.0kb upstream 2578   true scaffold_1: 3654765-3657342 Arabidopsis lyrata
AL1G20110 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 3654765-3655764 Arabidopsis lyrata
AL1G20110 1.0kb downstream 1.0kb downstream 2578   true scaffold_1: 3655765-3658342 Arabidopsis lyrata
AL1G20110 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 3657343-3658342 Arabidopsis lyrata
AL1G20110 2.0kb upstream 2.0kb upstream 3578   true scaffold_1: 3653765-3657342 Arabidopsis lyrata
AL1G20110 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 3653765-3655764 Arabidopsis lyrata
AL1G20110 2.0kb downstream 2.0kb downstream 3578   true scaffold_1: 3655765-3659342 Arabidopsis lyrata
AL1G20110 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 3657343-3659342 Arabidopsis lyrata
AL1G20110 5.0kb upstream 5.0kb upstream 6578   true scaffold_1: 3650765-3657342 Arabidopsis lyrata
AL1G20110 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 3650765-3655764 Arabidopsis lyrata
AL1G20110 5.0kb downstream 5.0kb downstream 6578   true scaffold_1: 3655765-3662342 Arabidopsis lyrata
AL1G20110 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 3657343-3662342 Arabidopsis lyrata
AL1G20110 10.0kb upstream 10.0kb upstream 11578   true scaffold_1: 3645765-3657342 Arabidopsis lyrata
AL1G20110 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 3645765-3655764 Arabidopsis lyrata
AL1G20110 10.0kb downstream 10.0kb downstream 11578   true scaffold_1: 3655765-3667342 Arabidopsis lyrata
AL1G20110 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 3657343-3667342 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369573 5261 Brassicaceae View MSA
123829866 5264 Brassicales-Malvales View MSA
124349960 5266 SBM View MSA
124245233 5268 Malvidae View MSA
124065325 5270 Rosid View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain