Gene : AL1G20000 A. lyrata v2.1

Defline:  (1 of 6) PTHR10366:SF362 - ALCOHOL DEHYDROGENASE-RELATED Genomic Order:  950
Name:  ? AL1G20000 Secondary Identifier:  ? PAC:35930753

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-361 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G20000 0.5kb upstream 0.5kb upstream 2053   true scaffold_1: 3615305-3617357 Arabidopsis lyrata
AL1G20000 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 3615305-3615804 Arabidopsis lyrata
AL1G20000 0.5kb downstream 0.5kb downstream 2053   true scaffold_1: 3615805-3617857 Arabidopsis lyrata
AL1G20000 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 3617358-3617857 Arabidopsis lyrata
AL1G20000 1.0kb upstream 1.0kb upstream 2553   true scaffold_1: 3614805-3617357 Arabidopsis lyrata
AL1G20000 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 3614805-3615804 Arabidopsis lyrata
AL1G20000 1.0kb downstream 1.0kb downstream 2553   true scaffold_1: 3615805-3618357 Arabidopsis lyrata
AL1G20000 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 3617358-3618357 Arabidopsis lyrata
AL1G20000 2.0kb upstream 2.0kb upstream 3553   true scaffold_1: 3613805-3617357 Arabidopsis lyrata
AL1G20000 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 3613805-3615804 Arabidopsis lyrata
AL1G20000 2.0kb downstream 2.0kb downstream 3553   true scaffold_1: 3615805-3619357 Arabidopsis lyrata
AL1G20000 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 3617358-3619357 Arabidopsis lyrata
AL1G20000 5.0kb upstream 5.0kb upstream 6553   true scaffold_1: 3610805-3617357 Arabidopsis lyrata
AL1G20000 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 3610805-3615804 Arabidopsis lyrata
AL1G20000 5.0kb downstream 5.0kb downstream 6553   true scaffold_1: 3615805-3622357 Arabidopsis lyrata
AL1G20000 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 3617358-3622357 Arabidopsis lyrata
AL1G20000 10.0kb upstream 10.0kb upstream 11553   true scaffold_1: 3605805-3617357 Arabidopsis lyrata
AL1G20000 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 3605805-3615804 Arabidopsis lyrata
AL1G20000 10.0kb downstream 10.0kb downstream 11553   true scaffold_1: 3615805-3627357 Arabidopsis lyrata
AL1G20000 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 3617358-3627357 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122328327 5261 Brassicaceae View MSA
123841739 5264 Brassicales-Malvales View MSA
124322998 5266 SBM View MSA
124169285 5268 Malvidae View MSA
124041060 5270 Rosid View MSA
123749871 5271 Pentapetalae View MSA
122798457 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain