Gene : AL1G31080 A. lyrata v2.1

Defline:  (1 of 1) K01079 - phosphoserine phosphatase (serB, PSPH) Genomic Order:  2007
Name:  ? AL1G31080 Secondary Identifier:  ? PAC:35935435

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata SER-GLYSYN-PWY Arabidopsis lyrata pathologic  
Alyrata SERSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G31080 0.5kb upstream 0.5kb upstream 2821   true scaffold_1: 7822911-7825731 Arabidopsis lyrata
AL1G31080 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 7825232-7825731 Arabidopsis lyrata
AL1G31080 0.5kb downstream 0.5kb downstream 2821   true scaffold_1: 7822411-7825231 Arabidopsis lyrata
AL1G31080 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 7822411-7822910 Arabidopsis lyrata
AL1G31080 1.0kb upstream 1.0kb upstream 3321   true scaffold_1: 7822911-7826231 Arabidopsis lyrata
AL1G31080 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 7825232-7826231 Arabidopsis lyrata
AL1G31080 1.0kb downstream 1.0kb downstream 3321   true scaffold_1: 7821911-7825231 Arabidopsis lyrata
AL1G31080 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 7821911-7822910 Arabidopsis lyrata
AL1G31080 2.0kb upstream 2.0kb upstream 4321   true scaffold_1: 7822911-7827231 Arabidopsis lyrata
AL1G31080 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 7825232-7827231 Arabidopsis lyrata
AL1G31080 2.0kb downstream 2.0kb downstream 4321   true scaffold_1: 7820911-7825231 Arabidopsis lyrata
AL1G31080 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 7820911-7822910 Arabidopsis lyrata
AL1G31080 5.0kb upstream 5.0kb upstream 7321   true scaffold_1: 7822911-7830231 Arabidopsis lyrata
AL1G31080 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 7825232-7830231 Arabidopsis lyrata
AL1G31080 5.0kb downstream 5.0kb downstream 7321   true scaffold_1: 7817911-7825231 Arabidopsis lyrata
AL1G31080 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 7817911-7822910 Arabidopsis lyrata
AL1G31080 10.0kb upstream 10.0kb upstream 12321   true scaffold_1: 7822911-7835231 Arabidopsis lyrata
AL1G31080 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 7825232-7835231 Arabidopsis lyrata
AL1G31080 10.0kb downstream 10.0kb downstream 12321   true scaffold_1: 7812911-7825231 Arabidopsis lyrata
AL1G31080 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 7812911-7822910 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360753 5261 Brassicaceae View MSA
123828386 5264 Brassicales-Malvales View MSA
124340863 5266 SBM View MSA
124243277 5268 Malvidae View MSA
124065988 5270 Rosid View MSA
123738315 5271 Pentapetalae View MSA
122789675 5272 Eudicot View MSA
122041828 5273 Angiosperm View MSA
121346713 5274 Embryophyte View MSA
123426809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain