Gene : AL1G30200 A. lyrata v2.1

Defline:  (1 of 1) PTHR19241//PTHR19241:SF271 - ATP-BINDING CASSETTE TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  1924
Name:  ? AL1G30200 Secondary Identifier:  ? PAC:35934842

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G30200 0.5kb upstream 0.5kb upstream 4319   true scaffold_1: 7503545-7507863 Arabidopsis lyrata
AL1G30200 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 7503545-7504044 Arabidopsis lyrata
AL1G30200 0.5kb downstream 0.5kb downstream 4319   true scaffold_1: 7504045-7508363 Arabidopsis lyrata
AL1G30200 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 7507864-7508363 Arabidopsis lyrata
AL1G30200 1.0kb upstream 1.0kb upstream 4819   true scaffold_1: 7503045-7507863 Arabidopsis lyrata
AL1G30200 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 7503045-7504044 Arabidopsis lyrata
AL1G30200 1.0kb downstream 1.0kb downstream 4819   true scaffold_1: 7504045-7508863 Arabidopsis lyrata
AL1G30200 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 7507864-7508863 Arabidopsis lyrata
AL1G30200 2.0kb upstream 2.0kb upstream 5819   true scaffold_1: 7502045-7507863 Arabidopsis lyrata
AL1G30200 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 7502045-7504044 Arabidopsis lyrata
AL1G30200 2.0kb downstream 2.0kb downstream 5819   true scaffold_1: 7504045-7509863 Arabidopsis lyrata
AL1G30200 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 7507864-7509863 Arabidopsis lyrata
AL1G30200 5.0kb upstream 5.0kb upstream 8819   true scaffold_1: 7499045-7507863 Arabidopsis lyrata
AL1G30200 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 7499045-7504044 Arabidopsis lyrata
AL1G30200 5.0kb downstream 5.0kb downstream 8819   true scaffold_1: 7504045-7512863 Arabidopsis lyrata
AL1G30200 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 7507864-7512863 Arabidopsis lyrata
AL1G30200 10.0kb upstream 10.0kb upstream 13819   true scaffold_1: 7494045-7507863 Arabidopsis lyrata
AL1G30200 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 7494045-7504044 Arabidopsis lyrata
AL1G30200 10.0kb downstream 10.0kb downstream 13819   true scaffold_1: 7504045-7517863 Arabidopsis lyrata
AL1G30200 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 7507864-7517863 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376931 5261 Brassicaceae View MSA
123829870 5264 Brassicales-Malvales View MSA
124343480 5266 SBM View MSA
124251010 5268 Malvidae View MSA
124066296 5270 Rosid View MSA
123736710 5271 Pentapetalae View MSA
122788967 5272 Eudicot View MSA
122051259 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain