Gene : AL1G30080 A. lyrata v2.1
Defline:  (1 of 1) K12197 - charged multivesicular body protein 1 (CHMP1, VPS46, DID2) Genomic Order:  1913
Name:  ? AL1G30080 Secondary Identifier:  ? PAC:35932306
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G30080 0.5kb upstream 0.5kb upstream 1889   true scaffold_1: 7448741-7450629 Arabidopsis lyrata
AL1G30080 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 7448741-7449240 Arabidopsis lyrata
AL1G30080 0.5kb downstream 0.5kb downstream 1889   true scaffold_1: 7449241-7451129 Arabidopsis lyrata
AL1G30080 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 7450630-7451129 Arabidopsis lyrata
AL1G30080 1.0kb upstream 1.0kb upstream 2389   true scaffold_1: 7448241-7450629 Arabidopsis lyrata
AL1G30080 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 7448241-7449240 Arabidopsis lyrata
AL1G30080 1.0kb downstream 1.0kb downstream 2389   true scaffold_1: 7449241-7451629 Arabidopsis lyrata
AL1G30080 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 7450630-7451629 Arabidopsis lyrata
AL1G30080 2.0kb upstream 2.0kb upstream 3389   true scaffold_1: 7447241-7450629 Arabidopsis lyrata
AL1G30080 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 7447241-7449240 Arabidopsis lyrata
AL1G30080 2.0kb downstream 2.0kb downstream 3389   true scaffold_1: 7449241-7452629 Arabidopsis lyrata
AL1G30080 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 7450630-7452629 Arabidopsis lyrata
AL1G30080 5.0kb upstream 5.0kb upstream 6389   true scaffold_1: 7444241-7450629 Arabidopsis lyrata
AL1G30080 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 7444241-7449240 Arabidopsis lyrata
AL1G30080 5.0kb downstream 5.0kb downstream 6389   true scaffold_1: 7449241-7455629 Arabidopsis lyrata
AL1G30080 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 7450630-7455629 Arabidopsis lyrata
AL1G30080 10.0kb upstream 10.0kb upstream 11389   true scaffold_1: 7439241-7450629 Arabidopsis lyrata
AL1G30080 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 7439241-7449240 Arabidopsis lyrata
AL1G30080 10.0kb downstream 10.0kb downstream 11389   true scaffold_1: 7449241-7460629 Arabidopsis lyrata
AL1G30080 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 7450630-7460629 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378234 5261 Brassicaceae View MSA
123831095 5264 Brassicales-Malvales View MSA
124341950 5266 SBM View MSA
124253428 5268 Malvidae View MSA
124063895 5270 Rosid View MSA
123748216 5271 Pentapetalae View MSA
122794716 5272 Eudicot View MSA
122044262 5273 Angiosperm View MSA
121349635 5274 Embryophyte View MSA
123427092 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain