Gene : AL80U10020 A. lyrata v2.1
Defline:  (1 of 2) PTHR11527//PTHR11527:SF161 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // SUBFAMILY NOT NAMED Genomic Order:  2
Name:  ? AL80U10020 Secondary Identifier:  ? PAC:35947529
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL80U10020 0.5kb upstream 0.5kb upstream 1042   true scaffold_80: 4996-6037 Arabidopsis lyrata
AL80U10020 0.5kb upstream 0.5kb upstream 500   false scaffold_80: 4996-5495 Arabidopsis lyrata
AL80U10020 0.5kb downstream 0.5kb downstream 1042   true scaffold_80: 5496-6537 Arabidopsis lyrata
AL80U10020 0.5kb downstream 0.5kb downstream 500   false scaffold_80: 6038-6537 Arabidopsis lyrata
AL80U10020 1.0kb upstream 1.0kb upstream 1542   true scaffold_80: 4496-6037 Arabidopsis lyrata
AL80U10020 1.0kb upstream 1.0kb upstream 1000   false scaffold_80: 4496-5495 Arabidopsis lyrata
AL80U10020 1.0kb downstream 1.0kb downstream 1542   true scaffold_80: 5496-7037 Arabidopsis lyrata
AL80U10020 1.0kb downstream 1.0kb downstream 1000   false scaffold_80: 6038-7037 Arabidopsis lyrata
AL80U10020 2.0kb upstream 2.0kb upstream 2542   true scaffold_80: 3496-6037 Arabidopsis lyrata
AL80U10020 2.0kb upstream 2.0kb upstream 2000   false scaffold_80: 3496-5495 Arabidopsis lyrata
AL80U10020 2.0kb downstream 2.0kb downstream 2542   true scaffold_80: 5496-8037 Arabidopsis lyrata
AL80U10020 2.0kb downstream 2.0kb downstream 2000   false scaffold_80: 6038-8037 Arabidopsis lyrata
AL80U10020 5.0kb upstream 5.0kb upstream 5542   true scaffold_80: 496-6037 Arabidopsis lyrata
AL80U10020 5.0kb upstream 5.0kb upstream 5000   false scaffold_80: 496-5495 Arabidopsis lyrata
AL80U10020 5.0kb downstream 5.0kb downstream 5542   true scaffold_80: 5496-11037 Arabidopsis lyrata
AL80U10020 5.0kb downstream 5.0kb downstream 5000   false scaffold_80: 6038-11037 Arabidopsis lyrata
AL80U10020 10.0kb upstream 10.0kb upstream 6037   true scaffold_80: 1-6037 Arabidopsis lyrata
AL80U10020 10.0kb upstream 10.0kb upstream 5495   false scaffold_80: 1-5495 Arabidopsis lyrata
AL80U10020 10.0kb downstream 10.0kb downstream 10542   true scaffold_80: 5496-16037 Arabidopsis lyrata
AL80U10020 10.0kb downstream 10.0kb downstream 10000   false scaffold_80: 6038-16037 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374333 5261 Brassicaceae View MSA
123800734 5264 Brassicales-Malvales View MSA
124298108 5266 SBM View MSA
124250112 5268 Malvidae View MSA
124060649 5270 Rosid View MSA
123750767 5271 Pentapetalae View MSA
122796138 5272 Eudicot View MSA
122051041 5273 Angiosperm View MSA
121312263 5274 Embryophyte View MSA
123349452 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain