Gene : Tp57577_TGAC_v2_gene25629 T. pratense v2
Defline:  (1 of 4) KOG2729 - ER vesicle integral membrane protein involved in establishing cell polarity, signaling and protein degradation Genomic Order:  1251
Name:  ? Tp57577_TGAC_v2_gene25629 Secondary Identifier:  ? PAC:35966017
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25629 0.5kb upstream 0.5kb upstream 5418 true Tp57577_TGAC_v2_LG4: 11920528-11925945 Trifolium pratense
Tp57577_TGAC_v2_gene25629 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 11920528-11921027 Trifolium pratense
Tp57577_TGAC_v2_gene25629 0.5kb downstream 0.5kb downstream 5418 true Tp57577_TGAC_v2_LG4: 11921028-11926445 Trifolium pratense
Tp57577_TGAC_v2_gene25629 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 11925946-11926445 Trifolium pratense
Tp57577_TGAC_v2_gene25629 1.0kb upstream 1.0kb upstream 5918 true Tp57577_TGAC_v2_LG4: 11920028-11925945 Trifolium pratense
Tp57577_TGAC_v2_gene25629 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 11920028-11921027 Trifolium pratense
Tp57577_TGAC_v2_gene25629 1.0kb downstream 1.0kb downstream 5918 true Tp57577_TGAC_v2_LG4: 11921028-11926945 Trifolium pratense
Tp57577_TGAC_v2_gene25629 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 11925946-11926945 Trifolium pratense
Tp57577_TGAC_v2_gene25629 2.0kb upstream 2.0kb upstream 6918 true Tp57577_TGAC_v2_LG4: 11919028-11925945 Trifolium pratense
Tp57577_TGAC_v2_gene25629 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 11919028-11921027 Trifolium pratense
Tp57577_TGAC_v2_gene25629 2.0kb downstream 2.0kb downstream 6918 true Tp57577_TGAC_v2_LG4: 11921028-11927945 Trifolium pratense
Tp57577_TGAC_v2_gene25629 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 11925946-11927945 Trifolium pratense
Tp57577_TGAC_v2_gene25629 5.0kb upstream 5.0kb upstream 9918 true Tp57577_TGAC_v2_LG4: 11916028-11925945 Trifolium pratense
Tp57577_TGAC_v2_gene25629 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 11916028-11921027 Trifolium pratense
Tp57577_TGAC_v2_gene25629 5.0kb downstream 5.0kb downstream 9918 true Tp57577_TGAC_v2_LG4: 11921028-11930945 Trifolium pratense
Tp57577_TGAC_v2_gene25629 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 11925946-11930945 Trifolium pratense
Tp57577_TGAC_v2_gene25629 10.0kb upstream 10.0kb upstream 14918 true Tp57577_TGAC_v2_LG4: 11911028-11925945 Trifolium pratense
Tp57577_TGAC_v2_gene25629 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 11911028-11921027 Trifolium pratense
Tp57577_TGAC_v2_gene25629 10.0kb downstream 10.0kb downstream 14918 true Tp57577_TGAC_v2_LG4: 11921028-11935945 Trifolium pratense
Tp57577_TGAC_v2_gene25629 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 11925946-11935945 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311032 5265 Fabidae View MSA
124067439 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain