Gene : Tp57577_TGAC_v2_gene25640 T. pratense v2
Defline:  (1 of 1) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 Genomic Order:  1277
Name:  ? Tp57577_TGAC_v2_gene25640 Secondary Identifier:  ? PAC:35965350
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25640 0.5kb upstream 0.5kb upstream 18292 true Tp57577_TGAC_v2_LG4: 12156105-12174396 Trifolium pratense
Tp57577_TGAC_v2_gene25640 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 12156105-12156604 Trifolium pratense
Tp57577_TGAC_v2_gene25640 0.5kb downstream 0.5kb downstream 18292 true Tp57577_TGAC_v2_LG4: 12156605-12174896 Trifolium pratense
Tp57577_TGAC_v2_gene25640 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 12174397-12174896 Trifolium pratense
Tp57577_TGAC_v2_gene25640 1.0kb upstream 1.0kb upstream 18792 true Tp57577_TGAC_v2_LG4: 12155605-12174396 Trifolium pratense
Tp57577_TGAC_v2_gene25640 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 12155605-12156604 Trifolium pratense
Tp57577_TGAC_v2_gene25640 1.0kb downstream 1.0kb downstream 18792 true Tp57577_TGAC_v2_LG4: 12156605-12175396 Trifolium pratense
Tp57577_TGAC_v2_gene25640 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 12174397-12175396 Trifolium pratense
Tp57577_TGAC_v2_gene25640 2.0kb upstream 2.0kb upstream 19792 true Tp57577_TGAC_v2_LG4: 12154605-12174396 Trifolium pratense
Tp57577_TGAC_v2_gene25640 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 12154605-12156604 Trifolium pratense
Tp57577_TGAC_v2_gene25640 2.0kb downstream 2.0kb downstream 19792 true Tp57577_TGAC_v2_LG4: 12156605-12176396 Trifolium pratense
Tp57577_TGAC_v2_gene25640 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 12174397-12176396 Trifolium pratense
Tp57577_TGAC_v2_gene25640 5.0kb upstream 5.0kb upstream 22792 true Tp57577_TGAC_v2_LG4: 12151605-12174396 Trifolium pratense
Tp57577_TGAC_v2_gene25640 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 12151605-12156604 Trifolium pratense
Tp57577_TGAC_v2_gene25640 5.0kb downstream 5.0kb downstream 22792 true Tp57577_TGAC_v2_LG4: 12156605-12179396 Trifolium pratense
Tp57577_TGAC_v2_gene25640 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 12174397-12179396 Trifolium pratense
Tp57577_TGAC_v2_gene25640 10.0kb upstream 10.0kb upstream 27792 true Tp57577_TGAC_v2_LG4: 12146605-12174396 Trifolium pratense
Tp57577_TGAC_v2_gene25640 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 12146605-12156604 Trifolium pratense
Tp57577_TGAC_v2_gene25640 10.0kb downstream 10.0kb downstream 27792 true Tp57577_TGAC_v2_LG4: 12156605-12184396 Trifolium pratense
Tp57577_TGAC_v2_gene25640 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 12174397-12184396 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307640 5265 Fabidae View MSA
124068574 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain