Gene : Tp57577_TGAC_v2_gene25668 T. pratense v2
Defline:  (1 of 59) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  1252
Name:  ? Tp57577_TGAC_v2_gene25668 Secondary Identifier:  ? PAC:35965198
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25668 0.5kb upstream 0.5kb upstream 5107 true Tp57577_TGAC_v2_LG4: 11940888-11945994 Trifolium pratense
Tp57577_TGAC_v2_gene25668 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 11940888-11941387 Trifolium pratense
Tp57577_TGAC_v2_gene25668 0.5kb downstream 0.5kb downstream 5107 true Tp57577_TGAC_v2_LG4: 11941388-11946494 Trifolium pratense
Tp57577_TGAC_v2_gene25668 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 11945995-11946494 Trifolium pratense
Tp57577_TGAC_v2_gene25668 1.0kb upstream 1.0kb upstream 5607 true Tp57577_TGAC_v2_LG4: 11940388-11945994 Trifolium pratense
Tp57577_TGAC_v2_gene25668 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 11940388-11941387 Trifolium pratense
Tp57577_TGAC_v2_gene25668 1.0kb downstream 1.0kb downstream 5607 true Tp57577_TGAC_v2_LG4: 11941388-11946994 Trifolium pratense
Tp57577_TGAC_v2_gene25668 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 11945995-11946994 Trifolium pratense
Tp57577_TGAC_v2_gene25668 2.0kb upstream 2.0kb upstream 6607 true Tp57577_TGAC_v2_LG4: 11939388-11945994 Trifolium pratense
Tp57577_TGAC_v2_gene25668 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 11939388-11941387 Trifolium pratense
Tp57577_TGAC_v2_gene25668 2.0kb downstream 2.0kb downstream 6607 true Tp57577_TGAC_v2_LG4: 11941388-11947994 Trifolium pratense
Tp57577_TGAC_v2_gene25668 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 11945995-11947994 Trifolium pratense
Tp57577_TGAC_v2_gene25668 5.0kb upstream 5.0kb upstream 9607 true Tp57577_TGAC_v2_LG4: 11936388-11945994 Trifolium pratense
Tp57577_TGAC_v2_gene25668 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 11936388-11941387 Trifolium pratense
Tp57577_TGAC_v2_gene25668 5.0kb downstream 5.0kb downstream 9607 true Tp57577_TGAC_v2_LG4: 11941388-11950994 Trifolium pratense
Tp57577_TGAC_v2_gene25668 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 11945995-11950994 Trifolium pratense
Tp57577_TGAC_v2_gene25668 10.0kb upstream 10.0kb upstream 14607 true Tp57577_TGAC_v2_LG4: 11931388-11945994 Trifolium pratense
Tp57577_TGAC_v2_gene25668 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 11931388-11941387 Trifolium pratense
Tp57577_TGAC_v2_gene25668 10.0kb downstream 10.0kb downstream 14607 true Tp57577_TGAC_v2_LG4: 11941388-11955994 Trifolium pratense
Tp57577_TGAC_v2_gene25668 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 11945995-11955994 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027491 5273 Angiosperm View MSA
122307035 5265 Fabidae View MSA
124074788 5270 Rosid View MSA
123753025 5271 Pentapetalae View MSA
122794671 5272 Eudicot View MSA
121352423 5274 Embryophyte View MSA
123382766 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain