Gene : Tp57577_TGAC_v2_gene30065 T. pratense v2

Defline:  (1 of 1) K03007 - DNA-directed RNA polymerases I, II, and III subunit RPABC5 (RPB10, POLR2L) Genomic Order:  898
Name:  ? Tp57577_TGAC_v2_gene30065 Secondary Identifier:  ? PAC:35964100

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30065 0.5kb upstream 0.5kb upstream 3112 true Tp57577_TGAC_v2_LG4: 8168196-8171307 Trifolium pratense
Tp57577_TGAC_v2_gene30065 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 8168196-8168695 Trifolium pratense
Tp57577_TGAC_v2_gene30065 0.5kb downstream 0.5kb downstream 3112 true Tp57577_TGAC_v2_LG4: 8168696-8171807 Trifolium pratense
Tp57577_TGAC_v2_gene30065 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 8171308-8171807 Trifolium pratense
Tp57577_TGAC_v2_gene30065 1.0kb upstream 1.0kb upstream 3612 true Tp57577_TGAC_v2_LG4: 8167696-8171307 Trifolium pratense
Tp57577_TGAC_v2_gene30065 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 8167696-8168695 Trifolium pratense
Tp57577_TGAC_v2_gene30065 1.0kb downstream 1.0kb downstream 3612 true Tp57577_TGAC_v2_LG4: 8168696-8172307 Trifolium pratense
Tp57577_TGAC_v2_gene30065 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 8171308-8172307 Trifolium pratense
Tp57577_TGAC_v2_gene30065 2.0kb upstream 2.0kb upstream 4612 true Tp57577_TGAC_v2_LG4: 8166696-8171307 Trifolium pratense
Tp57577_TGAC_v2_gene30065 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 8166696-8168695 Trifolium pratense
Tp57577_TGAC_v2_gene30065 2.0kb downstream 2.0kb downstream 4612 true Tp57577_TGAC_v2_LG4: 8168696-8173307 Trifolium pratense
Tp57577_TGAC_v2_gene30065 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 8171308-8173307 Trifolium pratense
Tp57577_TGAC_v2_gene30065 5.0kb upstream 5.0kb upstream 7612 true Tp57577_TGAC_v2_LG4: 8163696-8171307 Trifolium pratense
Tp57577_TGAC_v2_gene30065 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 8163696-8168695 Trifolium pratense
Tp57577_TGAC_v2_gene30065 5.0kb downstream 5.0kb downstream 7612 true Tp57577_TGAC_v2_LG4: 8168696-8176307 Trifolium pratense
Tp57577_TGAC_v2_gene30065 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 8171308-8176307 Trifolium pratense
Tp57577_TGAC_v2_gene30065 10.0kb upstream 10.0kb upstream 12612 true Tp57577_TGAC_v2_LG4: 8158696-8171307 Trifolium pratense
Tp57577_TGAC_v2_gene30065 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 8158696-8168695 Trifolium pratense
Tp57577_TGAC_v2_gene30065 10.0kb downstream 10.0kb downstream 12612 true Tp57577_TGAC_v2_LG4: 8168696-8181307 Trifolium pratense
Tp57577_TGAC_v2_gene30065 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 8171308-8181307 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300083 5265 Fabidae View MSA
124064582 5270 Rosid View MSA
123736869 5271 Pentapetalae View MSA
122788474 5272 Eudicot View MSA
122046178 5273 Angiosperm View MSA
121344110 5274 Embryophyte View MSA
123424802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain