Gene : Tp57577_TGAC_v2_gene30048 T. pratense v2
Defline:  (1 of 4) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  882
Name:  ? Tp57577_TGAC_v2_gene30048 Secondary Identifier:  ? PAC:35965387
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30048 0.5kb upstream 0.5kb upstream 3825 true Tp57577_TGAC_v2_LG4: 8013926-8017750 Trifolium pratense
Tp57577_TGAC_v2_gene30048 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 8013926-8014425 Trifolium pratense
Tp57577_TGAC_v2_gene30048 0.5kb downstream 0.5kb downstream 3825 true Tp57577_TGAC_v2_LG4: 8014426-8018250 Trifolium pratense
Tp57577_TGAC_v2_gene30048 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 8017751-8018250 Trifolium pratense
Tp57577_TGAC_v2_gene30048 1.0kb upstream 1.0kb upstream 4325 true Tp57577_TGAC_v2_LG4: 8013426-8017750 Trifolium pratense
Tp57577_TGAC_v2_gene30048 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 8013426-8014425 Trifolium pratense
Tp57577_TGAC_v2_gene30048 1.0kb downstream 1.0kb downstream 4325 true Tp57577_TGAC_v2_LG4: 8014426-8018750 Trifolium pratense
Tp57577_TGAC_v2_gene30048 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 8017751-8018750 Trifolium pratense
Tp57577_TGAC_v2_gene30048 2.0kb upstream 2.0kb upstream 5325 true Tp57577_TGAC_v2_LG4: 8012426-8017750 Trifolium pratense
Tp57577_TGAC_v2_gene30048 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 8012426-8014425 Trifolium pratense
Tp57577_TGAC_v2_gene30048 2.0kb downstream 2.0kb downstream 5325 true Tp57577_TGAC_v2_LG4: 8014426-8019750 Trifolium pratense
Tp57577_TGAC_v2_gene30048 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 8017751-8019750 Trifolium pratense
Tp57577_TGAC_v2_gene30048 5.0kb upstream 5.0kb upstream 8325 true Tp57577_TGAC_v2_LG4: 8009426-8017750 Trifolium pratense
Tp57577_TGAC_v2_gene30048 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 8009426-8014425 Trifolium pratense
Tp57577_TGAC_v2_gene30048 5.0kb downstream 5.0kb downstream 8325 true Tp57577_TGAC_v2_LG4: 8014426-8022750 Trifolium pratense
Tp57577_TGAC_v2_gene30048 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 8017751-8022750 Trifolium pratense
Tp57577_TGAC_v2_gene30048 10.0kb upstream 10.0kb upstream 13325 true Tp57577_TGAC_v2_LG4: 8004426-8017750 Trifolium pratense
Tp57577_TGAC_v2_gene30048 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 8004426-8014425 Trifolium pratense
Tp57577_TGAC_v2_gene30048 10.0kb downstream 10.0kb downstream 13325 true Tp57577_TGAC_v2_LG4: 8014426-8027750 Trifolium pratense
Tp57577_TGAC_v2_gene30048 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 8017751-8027750 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306230 5265 Fabidae View MSA
124064221 5270 Rosid View MSA
123752035 5271 Pentapetalae View MSA
122790420 5272 Eudicot View MSA
122050900 5273 Angiosperm View MSA
121343809 5274 Embryophyte View MSA
123427732 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain