Gene : Tp57577_TGAC_v2_gene3343 T. pratense v2
Defline:  (1 of 1) K03138 - transcription initiation factor TFIIF subunit alpha (TFIIF1, GTF2F1, TFG1) Genomic Order:  2389
Name:  ? Tp57577_TGAC_v2_gene3343 Secondary Identifier:  ? PAC:35965794
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3343 0.5kb upstream 0.5kb upstream 7739 true Tp57577_TGAC_v2_LG4: 22493765-22501503 Trifolium pratense
Tp57577_TGAC_v2_gene3343 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 22501004-22501503 Trifolium pratense
Tp57577_TGAC_v2_gene3343 0.5kb downstream 0.5kb downstream 7739 true Tp57577_TGAC_v2_LG4: 22493265-22501003 Trifolium pratense
Tp57577_TGAC_v2_gene3343 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 22493265-22493764 Trifolium pratense
Tp57577_TGAC_v2_gene3343 1.0kb upstream 1.0kb upstream 8239 true Tp57577_TGAC_v2_LG4: 22493765-22502003 Trifolium pratense
Tp57577_TGAC_v2_gene3343 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 22501004-22502003 Trifolium pratense
Tp57577_TGAC_v2_gene3343 1.0kb downstream 1.0kb downstream 8239 true Tp57577_TGAC_v2_LG4: 22492765-22501003 Trifolium pratense
Tp57577_TGAC_v2_gene3343 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 22492765-22493764 Trifolium pratense
Tp57577_TGAC_v2_gene3343 2.0kb upstream 2.0kb upstream 9239 true Tp57577_TGAC_v2_LG4: 22493765-22503003 Trifolium pratense
Tp57577_TGAC_v2_gene3343 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 22501004-22503003 Trifolium pratense
Tp57577_TGAC_v2_gene3343 2.0kb downstream 2.0kb downstream 9239 true Tp57577_TGAC_v2_LG4: 22491765-22501003 Trifolium pratense
Tp57577_TGAC_v2_gene3343 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 22491765-22493764 Trifolium pratense
Tp57577_TGAC_v2_gene3343 5.0kb upstream 5.0kb upstream 12239 true Tp57577_TGAC_v2_LG4: 22493765-22506003 Trifolium pratense
Tp57577_TGAC_v2_gene3343 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 22501004-22506003 Trifolium pratense
Tp57577_TGAC_v2_gene3343 5.0kb downstream 5.0kb downstream 12239 true Tp57577_TGAC_v2_LG4: 22488765-22501003 Trifolium pratense
Tp57577_TGAC_v2_gene3343 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 22488765-22493764 Trifolium pratense
Tp57577_TGAC_v2_gene3343 10.0kb upstream 10.0kb upstream 17239 true Tp57577_TGAC_v2_LG4: 22493765-22511003 Trifolium pratense
Tp57577_TGAC_v2_gene3343 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 22501004-22511003 Trifolium pratense
Tp57577_TGAC_v2_gene3343 10.0kb downstream 10.0kb downstream 17239 true Tp57577_TGAC_v2_LG4: 22483765-22501003 Trifolium pratense
Tp57577_TGAC_v2_gene3343 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 22483765-22493764 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314295 5265 Fabidae View MSA
124061584 5270 Rosid View MSA
123740754 5271 Pentapetalae View MSA
122785795 5272 Eudicot View MSA
122042161 5273 Angiosperm View MSA
121347251 5274 Embryophyte View MSA
123426399 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain