Gene : Tp57577_TGAC_v2_gene3506 T. pratense v2
Defline:  (1 of 2) K01956 - carbamoyl-phosphate synthase small subunit (carA, CPA1) Genomic Order:  1189
Name:  ? Tp57577_TGAC_v2_gene3506 Secondary Identifier:  ? PAC:35964563
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ARGSYNBSUB-PWY Trifolium pratense pathologic  
Tpratense CITRULBIO-PWY Trifolium pratense pathologic  
Tpratense GLUTAMINDEG-PWY Trifolium pratense pathologic  
Tpratense PWY0-162 Trifolium pratense pathologic  
Tpratense PWY-4984 Trifolium pratense pathologic  
Tpratense PWY-5686 Trifolium pratense pathologic  
Tpratense PWY-7211 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3506 0.5kb upstream 0.5kb upstream 5221 true Tp57577_TGAC_v2_LG4: 11263096-11268316 Trifolium pratense
Tp57577_TGAC_v2_gene3506 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 11267817-11268316 Trifolium pratense
Tp57577_TGAC_v2_gene3506 0.5kb downstream 0.5kb downstream 5221 true Tp57577_TGAC_v2_LG4: 11262596-11267816 Trifolium pratense
Tp57577_TGAC_v2_gene3506 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 11262596-11263095 Trifolium pratense
Tp57577_TGAC_v2_gene3506 1.0kb upstream 1.0kb upstream 5721 true Tp57577_TGAC_v2_LG4: 11263096-11268816 Trifolium pratense
Tp57577_TGAC_v2_gene3506 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 11267817-11268816 Trifolium pratense
Tp57577_TGAC_v2_gene3506 1.0kb downstream 1.0kb downstream 5721 true Tp57577_TGAC_v2_LG4: 11262096-11267816 Trifolium pratense
Tp57577_TGAC_v2_gene3506 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 11262096-11263095 Trifolium pratense
Tp57577_TGAC_v2_gene3506 2.0kb upstream 2.0kb upstream 6721 true Tp57577_TGAC_v2_LG4: 11263096-11269816 Trifolium pratense
Tp57577_TGAC_v2_gene3506 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 11267817-11269816 Trifolium pratense
Tp57577_TGAC_v2_gene3506 2.0kb downstream 2.0kb downstream 6721 true Tp57577_TGAC_v2_LG4: 11261096-11267816 Trifolium pratense
Tp57577_TGAC_v2_gene3506 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 11261096-11263095 Trifolium pratense
Tp57577_TGAC_v2_gene3506 5.0kb upstream 5.0kb upstream 9721 true Tp57577_TGAC_v2_LG4: 11263096-11272816 Trifolium pratense
Tp57577_TGAC_v2_gene3506 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 11267817-11272816 Trifolium pratense
Tp57577_TGAC_v2_gene3506 5.0kb downstream 5.0kb downstream 9721 true Tp57577_TGAC_v2_LG4: 11258096-11267816 Trifolium pratense
Tp57577_TGAC_v2_gene3506 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 11258096-11263095 Trifolium pratense
Tp57577_TGAC_v2_gene3506 10.0kb upstream 10.0kb upstream 14721 true Tp57577_TGAC_v2_LG4: 11263096-11277816 Trifolium pratense
Tp57577_TGAC_v2_gene3506 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 11267817-11277816 Trifolium pratense
Tp57577_TGAC_v2_gene3506 10.0kb downstream 10.0kb downstream 14721 true Tp57577_TGAC_v2_LG4: 11253096-11267816 Trifolium pratense
Tp57577_TGAC_v2_gene3506 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 11253096-11263095 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313354 5265 Fabidae View MSA
124069141 5270 Rosid View MSA
123739104 5271 Pentapetalae View MSA
122788005 5272 Eudicot View MSA
122046797 5273 Angiosperm View MSA
121347244 5274 Embryophyte View MSA
123423822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain