Gene : Tp57577_TGAC_v2_gene3471 T. pratense v2
Defline:  (1 of 509) PF13041 - PPR repeat family (PPR_2) Genomic Order:  1227
Name:  ? Tp57577_TGAC_v2_gene3471 Secondary Identifier:  ? PAC:35963753
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3471 0.5kb upstream 0.5kb upstream 3180 true Tp57577_TGAC_v2_LG4: 11650719-11653898 Trifolium pratense
Tp57577_TGAC_v2_gene3471 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 11653399-11653898 Trifolium pratense
Tp57577_TGAC_v2_gene3471 0.5kb downstream 0.5kb downstream 3180 true Tp57577_TGAC_v2_LG4: 11650219-11653398 Trifolium pratense
Tp57577_TGAC_v2_gene3471 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 11650219-11650718 Trifolium pratense
Tp57577_TGAC_v2_gene3471 1.0kb upstream 1.0kb upstream 3680 true Tp57577_TGAC_v2_LG4: 11650719-11654398 Trifolium pratense
Tp57577_TGAC_v2_gene3471 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 11653399-11654398 Trifolium pratense
Tp57577_TGAC_v2_gene3471 1.0kb downstream 1.0kb downstream 3680 true Tp57577_TGAC_v2_LG4: 11649719-11653398 Trifolium pratense
Tp57577_TGAC_v2_gene3471 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 11649719-11650718 Trifolium pratense
Tp57577_TGAC_v2_gene3471 2.0kb upstream 2.0kb upstream 4680 true Tp57577_TGAC_v2_LG4: 11650719-11655398 Trifolium pratense
Tp57577_TGAC_v2_gene3471 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 11653399-11655398 Trifolium pratense
Tp57577_TGAC_v2_gene3471 2.0kb downstream 2.0kb downstream 4680 true Tp57577_TGAC_v2_LG4: 11648719-11653398 Trifolium pratense
Tp57577_TGAC_v2_gene3471 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 11648719-11650718 Trifolium pratense
Tp57577_TGAC_v2_gene3471 5.0kb upstream 5.0kb upstream 7680 true Tp57577_TGAC_v2_LG4: 11650719-11658398 Trifolium pratense
Tp57577_TGAC_v2_gene3471 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 11653399-11658398 Trifolium pratense
Tp57577_TGAC_v2_gene3471 5.0kb downstream 5.0kb downstream 7680 true Tp57577_TGAC_v2_LG4: 11645719-11653398 Trifolium pratense
Tp57577_TGAC_v2_gene3471 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 11645719-11650718 Trifolium pratense
Tp57577_TGAC_v2_gene3471 10.0kb upstream 10.0kb upstream 12680 true Tp57577_TGAC_v2_LG4: 11650719-11663398 Trifolium pratense
Tp57577_TGAC_v2_gene3471 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 11653399-11663398 Trifolium pratense
Tp57577_TGAC_v2_gene3471 10.0kb downstream 10.0kb downstream 12680 true Tp57577_TGAC_v2_LG4: 11640719-11653398 Trifolium pratense
Tp57577_TGAC_v2_gene3471 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 11640719-11650718 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313793 5265 Fabidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain