Gene : Tp57577_TGAC_v2_gene3488 T. pratense v2
Defline:  (1 of 1) PTHR10584:SF181 - PUTATIVE-RELATED Genomic Order:  1230
Name:  ? Tp57577_TGAC_v2_gene3488 Secondary Identifier:  ? PAC:35966467
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-3801 Trifolium pratense pathologic  
Tpratense PWY-4101 Trifolium pratense pathologic  
Tpratense PWY-621 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3488 0.5kb upstream 0.5kb upstream 5481 true Tp57577_TGAC_v2_LG4: 11664296-11669776 Trifolium pratense
Tp57577_TGAC_v2_gene3488 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 11669277-11669776 Trifolium pratense
Tp57577_TGAC_v2_gene3488 0.5kb downstream 0.5kb downstream 5481 true Tp57577_TGAC_v2_LG4: 11663796-11669276 Trifolium pratense
Tp57577_TGAC_v2_gene3488 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 11663796-11664295 Trifolium pratense
Tp57577_TGAC_v2_gene3488 1.0kb upstream 1.0kb upstream 5981 true Tp57577_TGAC_v2_LG4: 11664296-11670276 Trifolium pratense
Tp57577_TGAC_v2_gene3488 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 11669277-11670276 Trifolium pratense
Tp57577_TGAC_v2_gene3488 1.0kb downstream 1.0kb downstream 5981 true Tp57577_TGAC_v2_LG4: 11663296-11669276 Trifolium pratense
Tp57577_TGAC_v2_gene3488 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 11663296-11664295 Trifolium pratense
Tp57577_TGAC_v2_gene3488 2.0kb upstream 2.0kb upstream 6981 true Tp57577_TGAC_v2_LG4: 11664296-11671276 Trifolium pratense
Tp57577_TGAC_v2_gene3488 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 11669277-11671276 Trifolium pratense
Tp57577_TGAC_v2_gene3488 2.0kb downstream 2.0kb downstream 6981 true Tp57577_TGAC_v2_LG4: 11662296-11669276 Trifolium pratense
Tp57577_TGAC_v2_gene3488 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 11662296-11664295 Trifolium pratense
Tp57577_TGAC_v2_gene3488 5.0kb upstream 5.0kb upstream 9981 true Tp57577_TGAC_v2_LG4: 11664296-11674276 Trifolium pratense
Tp57577_TGAC_v2_gene3488 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 11669277-11674276 Trifolium pratense
Tp57577_TGAC_v2_gene3488 5.0kb downstream 5.0kb downstream 9981 true Tp57577_TGAC_v2_LG4: 11659296-11669276 Trifolium pratense
Tp57577_TGAC_v2_gene3488 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 11659296-11664295 Trifolium pratense
Tp57577_TGAC_v2_gene3488 10.0kb upstream 10.0kb upstream 14981 true Tp57577_TGAC_v2_LG4: 11664296-11679276 Trifolium pratense
Tp57577_TGAC_v2_gene3488 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 11669277-11679276 Trifolium pratense
Tp57577_TGAC_v2_gene3488 10.0kb downstream 10.0kb downstream 14981 true Tp57577_TGAC_v2_LG4: 11654296-11669276 Trifolium pratense
Tp57577_TGAC_v2_gene3488 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 11654296-11664295 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299329 5265 Fabidae View MSA
124069533 5270 Rosid View MSA
123742774 5271 Pentapetalae View MSA
122790590 5272 Eudicot View MSA
122045850 5273 Angiosperm View MSA
121350713 5274 Embryophyte View MSA
123424695 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain