Gene : Tp57577_TGAC_v2_gene38744 T. pratense v2
Defline:  (1 of 1) PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC Genomic Order:  2719
Name:  ? Tp57577_TGAC_v2_gene38744 Secondary Identifier:  ? PAC:35965626
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY0-662 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38744 0.5kb upstream 0.5kb upstream 9316 true Tp57577_TGAC_v2_LG4: 25338118-25347433 Trifolium pratense
Tp57577_TGAC_v2_gene38744 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 25338118-25338617 Trifolium pratense
Tp57577_TGAC_v2_gene38744 0.5kb downstream 0.5kb downstream 9316 true Tp57577_TGAC_v2_LG4: 25338618-25347933 Trifolium pratense
Tp57577_TGAC_v2_gene38744 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 25347434-25347933 Trifolium pratense
Tp57577_TGAC_v2_gene38744 1.0kb upstream 1.0kb upstream 9816 true Tp57577_TGAC_v2_LG4: 25337618-25347433 Trifolium pratense
Tp57577_TGAC_v2_gene38744 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 25337618-25338617 Trifolium pratense
Tp57577_TGAC_v2_gene38744 1.0kb downstream 1.0kb downstream 9816 true Tp57577_TGAC_v2_LG4: 25338618-25348433 Trifolium pratense
Tp57577_TGAC_v2_gene38744 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 25347434-25348433 Trifolium pratense
Tp57577_TGAC_v2_gene38744 2.0kb upstream 2.0kb upstream 10816 true Tp57577_TGAC_v2_LG4: 25336618-25347433 Trifolium pratense
Tp57577_TGAC_v2_gene38744 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 25336618-25338617 Trifolium pratense
Tp57577_TGAC_v2_gene38744 2.0kb downstream 2.0kb downstream 10816 true Tp57577_TGAC_v2_LG4: 25338618-25349433 Trifolium pratense
Tp57577_TGAC_v2_gene38744 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 25347434-25349433 Trifolium pratense
Tp57577_TGAC_v2_gene38744 5.0kb upstream 5.0kb upstream 13816 true Tp57577_TGAC_v2_LG4: 25333618-25347433 Trifolium pratense
Tp57577_TGAC_v2_gene38744 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 25333618-25338617 Trifolium pratense
Tp57577_TGAC_v2_gene38744 5.0kb downstream 5.0kb downstream 13816 true Tp57577_TGAC_v2_LG4: 25338618-25352433 Trifolium pratense
Tp57577_TGAC_v2_gene38744 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 25347434-25352433 Trifolium pratense
Tp57577_TGAC_v2_gene38744 10.0kb upstream 10.0kb upstream 18816 true Tp57577_TGAC_v2_LG4: 25328618-25347433 Trifolium pratense
Tp57577_TGAC_v2_gene38744 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 25328618-25338617 Trifolium pratense
Tp57577_TGAC_v2_gene38744 10.0kb downstream 10.0kb downstream 18816 true Tp57577_TGAC_v2_LG4: 25338618-25357433 Trifolium pratense
Tp57577_TGAC_v2_gene38744 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 25347434-25357433 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304416 5265 Fabidae View MSA
124068369 5270 Rosid View MSA
123738172 5271 Pentapetalae View MSA
122787555 5272 Eudicot View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain