Gene : Tp57577_TGAC_v2_gene38820 T. pratense v2
Defline:  (1 of 3) K15813 - beta-amyrin synthase (LUP4) Genomic Order:  2791
Name:  ? Tp57577_TGAC_v2_gene38820 Secondary Identifier:  ? PAC:35966362
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5203 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38820 0.5kb upstream 0.5kb upstream 8927 true Tp57577_TGAC_v2_LG4: 25820921-25829847 Trifolium pratense
Tp57577_TGAC_v2_gene38820 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 25829348-25829847 Trifolium pratense
Tp57577_TGAC_v2_gene38820 0.5kb downstream 0.5kb downstream 8927 true Tp57577_TGAC_v2_LG4: 25820421-25829347 Trifolium pratense
Tp57577_TGAC_v2_gene38820 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 25820421-25820920 Trifolium pratense
Tp57577_TGAC_v2_gene38820 1.0kb upstream 1.0kb upstream 9427 true Tp57577_TGAC_v2_LG4: 25820921-25830347 Trifolium pratense
Tp57577_TGAC_v2_gene38820 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 25829348-25830347 Trifolium pratense
Tp57577_TGAC_v2_gene38820 1.0kb downstream 1.0kb downstream 9427 true Tp57577_TGAC_v2_LG4: 25819921-25829347 Trifolium pratense
Tp57577_TGAC_v2_gene38820 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 25819921-25820920 Trifolium pratense
Tp57577_TGAC_v2_gene38820 2.0kb upstream 2.0kb upstream 10427 true Tp57577_TGAC_v2_LG4: 25820921-25831347 Trifolium pratense
Tp57577_TGAC_v2_gene38820 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 25829348-25831347 Trifolium pratense
Tp57577_TGAC_v2_gene38820 2.0kb downstream 2.0kb downstream 10427 true Tp57577_TGAC_v2_LG4: 25818921-25829347 Trifolium pratense
Tp57577_TGAC_v2_gene38820 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 25818921-25820920 Trifolium pratense
Tp57577_TGAC_v2_gene38820 5.0kb upstream 5.0kb upstream 13427 true Tp57577_TGAC_v2_LG4: 25820921-25834347 Trifolium pratense
Tp57577_TGAC_v2_gene38820 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 25829348-25834347 Trifolium pratense
Tp57577_TGAC_v2_gene38820 5.0kb downstream 5.0kb downstream 13427 true Tp57577_TGAC_v2_LG4: 25815921-25829347 Trifolium pratense
Tp57577_TGAC_v2_gene38820 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 25815921-25820920 Trifolium pratense
Tp57577_TGAC_v2_gene38820 10.0kb upstream 10.0kb upstream 18427 true Tp57577_TGAC_v2_LG4: 25820921-25839347 Trifolium pratense
Tp57577_TGAC_v2_gene38820 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 25829348-25839347 Trifolium pratense
Tp57577_TGAC_v2_gene38820 10.0kb downstream 10.0kb downstream 18427 true Tp57577_TGAC_v2_LG4: 25810921-25829347 Trifolium pratense
Tp57577_TGAC_v2_gene38820 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 25810921-25820920 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791741 5273 Angiosperm View MSA
122308588 5265 Fabidae View MSA
124062069 5270 Rosid View MSA
123738080 5271 Pentapetalae View MSA
122788516 5272 Eudicot View MSA
121063041 5274 Embryophyte View MSA
123102827 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain