Gene : Tp57577_TGAC_v2_gene38787 T. pratense v2
Defline:  (1 of 3) K16903 - L-tryptophan---pyruvate aminotransferase (TAA1) Genomic Order:  2725
Name:  ? Tp57577_TGAC_v2_gene38787 Secondary Identifier:  ? PAC:35965262
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWYDQC-4 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38787 0.5kb upstream 0.5kb upstream 3681 true Tp57577_TGAC_v2_LG4: 25394597-25398277 Trifolium pratense
Tp57577_TGAC_v2_gene38787 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 25397778-25398277 Trifolium pratense
Tp57577_TGAC_v2_gene38787 0.5kb downstream 0.5kb downstream 3681 true Tp57577_TGAC_v2_LG4: 25394097-25397777 Trifolium pratense
Tp57577_TGAC_v2_gene38787 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 25394097-25394596 Trifolium pratense
Tp57577_TGAC_v2_gene38787 1.0kb upstream 1.0kb upstream 4181 true Tp57577_TGAC_v2_LG4: 25394597-25398777 Trifolium pratense
Tp57577_TGAC_v2_gene38787 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 25397778-25398777 Trifolium pratense
Tp57577_TGAC_v2_gene38787 1.0kb downstream 1.0kb downstream 4181 true Tp57577_TGAC_v2_LG4: 25393597-25397777 Trifolium pratense
Tp57577_TGAC_v2_gene38787 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 25393597-25394596 Trifolium pratense
Tp57577_TGAC_v2_gene38787 2.0kb upstream 2.0kb upstream 5181 true Tp57577_TGAC_v2_LG4: 25394597-25399777 Trifolium pratense
Tp57577_TGAC_v2_gene38787 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 25397778-25399777 Trifolium pratense
Tp57577_TGAC_v2_gene38787 2.0kb downstream 2.0kb downstream 5181 true Tp57577_TGAC_v2_LG4: 25392597-25397777 Trifolium pratense
Tp57577_TGAC_v2_gene38787 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 25392597-25394596 Trifolium pratense
Tp57577_TGAC_v2_gene38787 5.0kb upstream 5.0kb upstream 8181 true Tp57577_TGAC_v2_LG4: 25394597-25402777 Trifolium pratense
Tp57577_TGAC_v2_gene38787 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 25397778-25402777 Trifolium pratense
Tp57577_TGAC_v2_gene38787 5.0kb downstream 5.0kb downstream 8181 true Tp57577_TGAC_v2_LG4: 25389597-25397777 Trifolium pratense
Tp57577_TGAC_v2_gene38787 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 25389597-25394596 Trifolium pratense
Tp57577_TGAC_v2_gene38787 10.0kb upstream 10.0kb upstream 13181 true Tp57577_TGAC_v2_LG4: 25394597-25407777 Trifolium pratense
Tp57577_TGAC_v2_gene38787 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 25397778-25407777 Trifolium pratense
Tp57577_TGAC_v2_gene38787 10.0kb downstream 10.0kb downstream 13181 true Tp57577_TGAC_v2_LG4: 25384597-25397777 Trifolium pratense
Tp57577_TGAC_v2_gene38787 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 25384597-25394596 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791878 5273 Angiosperm View MSA
122299117 5265 Fabidae View MSA
124063214 5270 Rosid View MSA
123745663 5271 Pentapetalae View MSA
122794997 5272 Eudicot View MSA
121350160 5274 Embryophyte View MSA
123381598 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain