Gene : Tp57577_TGAC_v2_gene38654 T. pratense v2
Defline:  (1 of 3) PTHR33921:SF2 - CALVIN CYCLE PROTEIN CP12-1, CHLOROPLASTIC-RELATED Genomic Order:  2620
Name:  ? Tp57577_TGAC_v2_gene38654 Secondary Identifier:  ? PAC:35965472
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38654 0.5kb upstream 0.5kb upstream 1340 true Tp57577_TGAC_v2_LG4: 24474008-24475347 Trifolium pratense
Tp57577_TGAC_v2_gene38654 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 24474008-24474507 Trifolium pratense
Tp57577_TGAC_v2_gene38654 0.5kb downstream 0.5kb downstream 1340 true Tp57577_TGAC_v2_LG4: 24474508-24475847 Trifolium pratense
Tp57577_TGAC_v2_gene38654 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 24475348-24475847 Trifolium pratense
Tp57577_TGAC_v2_gene38654 1.0kb upstream 1.0kb upstream 1840 true Tp57577_TGAC_v2_LG4: 24473508-24475347 Trifolium pratense
Tp57577_TGAC_v2_gene38654 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 24473508-24474507 Trifolium pratense
Tp57577_TGAC_v2_gene38654 1.0kb downstream 1.0kb downstream 1840 true Tp57577_TGAC_v2_LG4: 24474508-24476347 Trifolium pratense
Tp57577_TGAC_v2_gene38654 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 24475348-24476347 Trifolium pratense
Tp57577_TGAC_v2_gene38654 2.0kb upstream 2.0kb upstream 2840 true Tp57577_TGAC_v2_LG4: 24472508-24475347 Trifolium pratense
Tp57577_TGAC_v2_gene38654 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 24472508-24474507 Trifolium pratense
Tp57577_TGAC_v2_gene38654 2.0kb downstream 2.0kb downstream 2840 true Tp57577_TGAC_v2_LG4: 24474508-24477347 Trifolium pratense
Tp57577_TGAC_v2_gene38654 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 24475348-24477347 Trifolium pratense
Tp57577_TGAC_v2_gene38654 5.0kb upstream 5.0kb upstream 5840 true Tp57577_TGAC_v2_LG4: 24469508-24475347 Trifolium pratense
Tp57577_TGAC_v2_gene38654 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 24469508-24474507 Trifolium pratense
Tp57577_TGAC_v2_gene38654 5.0kb downstream 5.0kb downstream 5840 true Tp57577_TGAC_v2_LG4: 24474508-24480347 Trifolium pratense
Tp57577_TGAC_v2_gene38654 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 24475348-24480347 Trifolium pratense
Tp57577_TGAC_v2_gene38654 10.0kb upstream 10.0kb upstream 10840 true Tp57577_TGAC_v2_LG4: 24464508-24475347 Trifolium pratense
Tp57577_TGAC_v2_gene38654 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 24464508-24474507 Trifolium pratense
Tp57577_TGAC_v2_gene38654 10.0kb downstream 10.0kb downstream 10840 true Tp57577_TGAC_v2_LG4: 24474508-24485347 Trifolium pratense
Tp57577_TGAC_v2_gene38654 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 24475348-24485347 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298035 5265 Fabidae View MSA
124070241 5270 Rosid View MSA
123742696 5271 Pentapetalae View MSA
122795504 5272 Eudicot View MSA
122046618 5273 Angiosperm View MSA
121351753 5274 Embryophyte View MSA
123424034 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain