Gene : Tp57577_TGAC_v2_gene38696 T. pratense v2
Defline:  (1 of 1) PTHR31460:SF0 - EXPRESSED PROTEIN-RELATED Genomic Order:  2618
Name:  ? Tp57577_TGAC_v2_gene38696 Secondary Identifier:  ? PAC:35965530
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38696 0.5kb upstream 0.5kb upstream 3848 true Tp57577_TGAC_v2_LG4: 24465170-24469017 Trifolium pratense
Tp57577_TGAC_v2_gene38696 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 24468518-24469017 Trifolium pratense
Tp57577_TGAC_v2_gene38696 0.5kb downstream 0.5kb downstream 3848 true Tp57577_TGAC_v2_LG4: 24464670-24468517 Trifolium pratense
Tp57577_TGAC_v2_gene38696 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 24464670-24465169 Trifolium pratense
Tp57577_TGAC_v2_gene38696 1.0kb upstream 1.0kb upstream 4348 true Tp57577_TGAC_v2_LG4: 24465170-24469517 Trifolium pratense
Tp57577_TGAC_v2_gene38696 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 24468518-24469517 Trifolium pratense
Tp57577_TGAC_v2_gene38696 1.0kb downstream 1.0kb downstream 4348 true Tp57577_TGAC_v2_LG4: 24464170-24468517 Trifolium pratense
Tp57577_TGAC_v2_gene38696 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 24464170-24465169 Trifolium pratense
Tp57577_TGAC_v2_gene38696 2.0kb upstream 2.0kb upstream 5348 true Tp57577_TGAC_v2_LG4: 24465170-24470517 Trifolium pratense
Tp57577_TGAC_v2_gene38696 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 24468518-24470517 Trifolium pratense
Tp57577_TGAC_v2_gene38696 2.0kb downstream 2.0kb downstream 5348 true Tp57577_TGAC_v2_LG4: 24463170-24468517 Trifolium pratense
Tp57577_TGAC_v2_gene38696 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 24463170-24465169 Trifolium pratense
Tp57577_TGAC_v2_gene38696 5.0kb upstream 5.0kb upstream 8348 true Tp57577_TGAC_v2_LG4: 24465170-24473517 Trifolium pratense
Tp57577_TGAC_v2_gene38696 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 24468518-24473517 Trifolium pratense
Tp57577_TGAC_v2_gene38696 5.0kb downstream 5.0kb downstream 8348 true Tp57577_TGAC_v2_LG4: 24460170-24468517 Trifolium pratense
Tp57577_TGAC_v2_gene38696 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 24460170-24465169 Trifolium pratense
Tp57577_TGAC_v2_gene38696 10.0kb upstream 10.0kb upstream 13348 true Tp57577_TGAC_v2_LG4: 24465170-24478517 Trifolium pratense
Tp57577_TGAC_v2_gene38696 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 24468518-24478517 Trifolium pratense
Tp57577_TGAC_v2_gene38696 10.0kb downstream 10.0kb downstream 13348 true Tp57577_TGAC_v2_LG4: 24455170-24468517 Trifolium pratense
Tp57577_TGAC_v2_gene38696 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 24455170-24465169 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308537 5265 Fabidae View MSA
124060469 5270 Rosid View MSA
123747779 5271 Pentapetalae View MSA
122785599 5272 Eudicot View MSA
122044285 5273 Angiosperm View MSA
121351602 5274 Embryophyte View MSA
123382243 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain