Gene : Tp57577_TGAC_v2_gene4627 T. pratense v2
Defline:  (1 of 3) K01681 - aconitate hydratase (ACO, acnA) Genomic Order:  1734
Name:  ? Tp57577_TGAC_v2_gene4627 Secondary Identifier:  ? PAC:35965956
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLYOXYLATE-BYPASS Trifolium pratense pathologic  
Tpratense PWY-5464 Trifolium pratense pathologic  
Tpratense PWY-561 Trifolium pratense pathologic  
Tpratense PWY-5690 Trifolium pratense pathologic  
Tpratense PWY-6549 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4627 0.5kb upstream 0.5kb upstream 9415 true Tp57577_TGAC_v2_LG4: 16414842-16424256 Trifolium pratense
Tp57577_TGAC_v2_gene4627 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 16423757-16424256 Trifolium pratense
Tp57577_TGAC_v2_gene4627 0.5kb downstream 0.5kb downstream 9415 true Tp57577_TGAC_v2_LG4: 16414342-16423756 Trifolium pratense
Tp57577_TGAC_v2_gene4627 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 16414342-16414841 Trifolium pratense
Tp57577_TGAC_v2_gene4627 1.0kb upstream 1.0kb upstream 9915 true Tp57577_TGAC_v2_LG4: 16414842-16424756 Trifolium pratense
Tp57577_TGAC_v2_gene4627 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 16423757-16424756 Trifolium pratense
Tp57577_TGAC_v2_gene4627 1.0kb downstream 1.0kb downstream 9915 true Tp57577_TGAC_v2_LG4: 16413842-16423756 Trifolium pratense
Tp57577_TGAC_v2_gene4627 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 16413842-16414841 Trifolium pratense
Tp57577_TGAC_v2_gene4627 2.0kb upstream 2.0kb upstream 10915 true Tp57577_TGAC_v2_LG4: 16414842-16425756 Trifolium pratense
Tp57577_TGAC_v2_gene4627 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 16423757-16425756 Trifolium pratense
Tp57577_TGAC_v2_gene4627 2.0kb downstream 2.0kb downstream 10915 true Tp57577_TGAC_v2_LG4: 16412842-16423756 Trifolium pratense
Tp57577_TGAC_v2_gene4627 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 16412842-16414841 Trifolium pratense
Tp57577_TGAC_v2_gene4627 5.0kb upstream 5.0kb upstream 13915 true Tp57577_TGAC_v2_LG4: 16414842-16428756 Trifolium pratense
Tp57577_TGAC_v2_gene4627 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 16423757-16428756 Trifolium pratense
Tp57577_TGAC_v2_gene4627 5.0kb downstream 5.0kb downstream 13915 true Tp57577_TGAC_v2_LG4: 16409842-16423756 Trifolium pratense
Tp57577_TGAC_v2_gene4627 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 16409842-16414841 Trifolium pratense
Tp57577_TGAC_v2_gene4627 10.0kb upstream 10.0kb upstream 18915 true Tp57577_TGAC_v2_LG4: 16414842-16433756 Trifolium pratense
Tp57577_TGAC_v2_gene4627 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 16423757-16433756 Trifolium pratense
Tp57577_TGAC_v2_gene4627 10.0kb downstream 10.0kb downstream 18915 true Tp57577_TGAC_v2_LG4: 16404842-16423756 Trifolium pratense
Tp57577_TGAC_v2_gene4627 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 16404842-16414841 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296537 5265 Fabidae View MSA
124069488 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain