Gene : Tp57577_TGAC_v2_gene4634 T. pratense v2
Defline:  (1 of 11) PF13229 - Right handed beta helix region (Beta_helix) Genomic Order:  1744
Name:  ? Tp57577_TGAC_v2_gene4634 Secondary Identifier:  ? PAC:35966094
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1081 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4634 0.5kb upstream 0.5kb upstream 4675 true Tp57577_TGAC_v2_LG4: 16502349-16507023 Trifolium pratense
Tp57577_TGAC_v2_gene4634 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 16502349-16502848 Trifolium pratense
Tp57577_TGAC_v2_gene4634 0.5kb downstream 0.5kb downstream 4675 true Tp57577_TGAC_v2_LG4: 16502849-16507523 Trifolium pratense
Tp57577_TGAC_v2_gene4634 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 16507024-16507523 Trifolium pratense
Tp57577_TGAC_v2_gene4634 1.0kb upstream 1.0kb upstream 5175 true Tp57577_TGAC_v2_LG4: 16501849-16507023 Trifolium pratense
Tp57577_TGAC_v2_gene4634 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 16501849-16502848 Trifolium pratense
Tp57577_TGAC_v2_gene4634 1.0kb downstream 1.0kb downstream 5175 true Tp57577_TGAC_v2_LG4: 16502849-16508023 Trifolium pratense
Tp57577_TGAC_v2_gene4634 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 16507024-16508023 Trifolium pratense
Tp57577_TGAC_v2_gene4634 2.0kb upstream 2.0kb upstream 6175 true Tp57577_TGAC_v2_LG4: 16500849-16507023 Trifolium pratense
Tp57577_TGAC_v2_gene4634 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 16500849-16502848 Trifolium pratense
Tp57577_TGAC_v2_gene4634 2.0kb downstream 2.0kb downstream 6175 true Tp57577_TGAC_v2_LG4: 16502849-16509023 Trifolium pratense
Tp57577_TGAC_v2_gene4634 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 16507024-16509023 Trifolium pratense
Tp57577_TGAC_v2_gene4634 5.0kb upstream 5.0kb upstream 9175 true Tp57577_TGAC_v2_LG4: 16497849-16507023 Trifolium pratense
Tp57577_TGAC_v2_gene4634 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 16497849-16502848 Trifolium pratense
Tp57577_TGAC_v2_gene4634 5.0kb downstream 5.0kb downstream 9175 true Tp57577_TGAC_v2_LG4: 16502849-16512023 Trifolium pratense
Tp57577_TGAC_v2_gene4634 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 16507024-16512023 Trifolium pratense
Tp57577_TGAC_v2_gene4634 10.0kb upstream 10.0kb upstream 14175 true Tp57577_TGAC_v2_LG4: 16492849-16507023 Trifolium pratense
Tp57577_TGAC_v2_gene4634 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 16492849-16502848 Trifolium pratense
Tp57577_TGAC_v2_gene4634 10.0kb downstream 10.0kb downstream 14175 true Tp57577_TGAC_v2_LG4: 16502849-16517023 Trifolium pratense
Tp57577_TGAC_v2_gene4634 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 16507024-16517023 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297857 5265 Fabidae View MSA
124070803 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain