Gene : Tp57577_TGAC_v2_gene5815 T. pratense v2
Defline:  (1 of 79) PF00892 - EamA-like transporter family (EamA) Genomic Order:  1541
Name:  ? Tp57577_TGAC_v2_gene5815 Secondary Identifier:  ? PAC:35965843
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5815 0.5kb upstream 0.5kb upstream 5160 true Tp57577_TGAC_v2_LG4: 14654795-14659954 Trifolium pratense
Tp57577_TGAC_v2_gene5815 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 14654795-14655294 Trifolium pratense
Tp57577_TGAC_v2_gene5815 0.5kb downstream 0.5kb downstream 5160 true Tp57577_TGAC_v2_LG4: 14655295-14660454 Trifolium pratense
Tp57577_TGAC_v2_gene5815 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 14659955-14660454 Trifolium pratense
Tp57577_TGAC_v2_gene5815 1.0kb upstream 1.0kb upstream 5660 true Tp57577_TGAC_v2_LG4: 14654295-14659954 Trifolium pratense
Tp57577_TGAC_v2_gene5815 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 14654295-14655294 Trifolium pratense
Tp57577_TGAC_v2_gene5815 1.0kb downstream 1.0kb downstream 5660 true Tp57577_TGAC_v2_LG4: 14655295-14660954 Trifolium pratense
Tp57577_TGAC_v2_gene5815 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 14659955-14660954 Trifolium pratense
Tp57577_TGAC_v2_gene5815 2.0kb upstream 2.0kb upstream 6660 true Tp57577_TGAC_v2_LG4: 14653295-14659954 Trifolium pratense
Tp57577_TGAC_v2_gene5815 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 14653295-14655294 Trifolium pratense
Tp57577_TGAC_v2_gene5815 2.0kb downstream 2.0kb downstream 6660 true Tp57577_TGAC_v2_LG4: 14655295-14661954 Trifolium pratense
Tp57577_TGAC_v2_gene5815 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 14659955-14661954 Trifolium pratense
Tp57577_TGAC_v2_gene5815 5.0kb upstream 5.0kb upstream 9660 true Tp57577_TGAC_v2_LG4: 14650295-14659954 Trifolium pratense
Tp57577_TGAC_v2_gene5815 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 14650295-14655294 Trifolium pratense
Tp57577_TGAC_v2_gene5815 5.0kb downstream 5.0kb downstream 9660 true Tp57577_TGAC_v2_LG4: 14655295-14664954 Trifolium pratense
Tp57577_TGAC_v2_gene5815 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 14659955-14664954 Trifolium pratense
Tp57577_TGAC_v2_gene5815 10.0kb upstream 10.0kb upstream 14660 true Tp57577_TGAC_v2_LG4: 14645295-14659954 Trifolium pratense
Tp57577_TGAC_v2_gene5815 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 14645295-14655294 Trifolium pratense
Tp57577_TGAC_v2_gene5815 10.0kb downstream 10.0kb downstream 14660 true Tp57577_TGAC_v2_LG4: 14655295-14669954 Trifolium pratense
Tp57577_TGAC_v2_gene5815 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 14659955-14669954 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121638829 5273 Angiosperm Singleton cluster - no MSA
122277731 5265 Fabidae Singleton cluster - no MSA
124018253 5270 Rosid Singleton cluster - no MSA
123592093 5271 Pentapetalae Singleton cluster - no MSA
122626784 5272 Eudicot Singleton cluster - no MSA
120910933 5274 Embryophyte Singleton cluster - no MSA
122951582 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain