Gene : Tp57577_TGAC_v2_gene6149 T. pratense v2
Defline:  (1 of 1) PTHR10906:SF2 - PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC Genomic Order:  687
Name:  ? Tp57577_TGAC_v2_gene6149 Secondary Identifier:  ? PAC:35965954
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6149 0.5kb upstream 0.5kb upstream 7911 true Tp57577_TGAC_v2_LG4: 6275823-6283733 Trifolium pratense
Tp57577_TGAC_v2_gene6149 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 6283234-6283733 Trifolium pratense
Tp57577_TGAC_v2_gene6149 0.5kb downstream 0.5kb downstream 7911 true Tp57577_TGAC_v2_LG4: 6275323-6283233 Trifolium pratense
Tp57577_TGAC_v2_gene6149 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 6275323-6275822 Trifolium pratense
Tp57577_TGAC_v2_gene6149 1.0kb upstream 1.0kb upstream 8411 true Tp57577_TGAC_v2_LG4: 6275823-6284233 Trifolium pratense
Tp57577_TGAC_v2_gene6149 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 6283234-6284233 Trifolium pratense
Tp57577_TGAC_v2_gene6149 1.0kb downstream 1.0kb downstream 8411 true Tp57577_TGAC_v2_LG4: 6274823-6283233 Trifolium pratense
Tp57577_TGAC_v2_gene6149 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 6274823-6275822 Trifolium pratense
Tp57577_TGAC_v2_gene6149 2.0kb upstream 2.0kb upstream 9411 true Tp57577_TGAC_v2_LG4: 6275823-6285233 Trifolium pratense
Tp57577_TGAC_v2_gene6149 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 6283234-6285233 Trifolium pratense
Tp57577_TGAC_v2_gene6149 2.0kb downstream 2.0kb downstream 9411 true Tp57577_TGAC_v2_LG4: 6273823-6283233 Trifolium pratense
Tp57577_TGAC_v2_gene6149 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 6273823-6275822 Trifolium pratense
Tp57577_TGAC_v2_gene6149 5.0kb upstream 5.0kb upstream 12411 true Tp57577_TGAC_v2_LG4: 6275823-6288233 Trifolium pratense
Tp57577_TGAC_v2_gene6149 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 6283234-6288233 Trifolium pratense
Tp57577_TGAC_v2_gene6149 5.0kb downstream 5.0kb downstream 12411 true Tp57577_TGAC_v2_LG4: 6270823-6283233 Trifolium pratense
Tp57577_TGAC_v2_gene6149 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 6270823-6275822 Trifolium pratense
Tp57577_TGAC_v2_gene6149 10.0kb upstream 10.0kb upstream 17411 true Tp57577_TGAC_v2_LG4: 6275823-6293233 Trifolium pratense
Tp57577_TGAC_v2_gene6149 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 6283234-6293233 Trifolium pratense
Tp57577_TGAC_v2_gene6149 10.0kb downstream 10.0kb downstream 17411 true Tp57577_TGAC_v2_LG4: 6265823-6283233 Trifolium pratense
Tp57577_TGAC_v2_gene6149 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 6265823-6275822 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301326 5265 Fabidae View MSA
124061743 5270 Rosid View MSA
123737795 5271 Pentapetalae View MSA
122790325 5272 Eudicot View MSA
122042778 5273 Angiosperm View MSA
121345832 5274 Embryophyte View MSA
123425781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain