Gene : Tp57577_TGAC_v2_gene5559 T. pratense v2
Defline:  (1 of 1) KOG4159 - Predicted E3 ubiquitin ligase Genomic Order:  3039
Name:  ? Tp57577_TGAC_v2_gene5559 Secondary Identifier:  ? PAC:35964513
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5559 0.5kb upstream 0.5kb upstream 6546 true Tp57577_TGAC_v2_LG4: 27845381-27851926 Trifolium pratense
Tp57577_TGAC_v2_gene5559 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 27851427-27851926 Trifolium pratense
Tp57577_TGAC_v2_gene5559 0.5kb downstream 0.5kb downstream 6546 true Tp57577_TGAC_v2_LG4: 27844881-27851426 Trifolium pratense
Tp57577_TGAC_v2_gene5559 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 27844881-27845380 Trifolium pratense
Tp57577_TGAC_v2_gene5559 1.0kb upstream 1.0kb upstream 7046 true Tp57577_TGAC_v2_LG4: 27845381-27852426 Trifolium pratense
Tp57577_TGAC_v2_gene5559 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 27851427-27852426 Trifolium pratense
Tp57577_TGAC_v2_gene5559 1.0kb downstream 1.0kb downstream 7046 true Tp57577_TGAC_v2_LG4: 27844381-27851426 Trifolium pratense
Tp57577_TGAC_v2_gene5559 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 27844381-27845380 Trifolium pratense
Tp57577_TGAC_v2_gene5559 2.0kb upstream 2.0kb upstream 8046 true Tp57577_TGAC_v2_LG4: 27845381-27853426 Trifolium pratense
Tp57577_TGAC_v2_gene5559 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 27851427-27853426 Trifolium pratense
Tp57577_TGAC_v2_gene5559 2.0kb downstream 2.0kb downstream 8046 true Tp57577_TGAC_v2_LG4: 27843381-27851426 Trifolium pratense
Tp57577_TGAC_v2_gene5559 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 27843381-27845380 Trifolium pratense
Tp57577_TGAC_v2_gene5559 5.0kb upstream 5.0kb upstream 11046 true Tp57577_TGAC_v2_LG4: 27845381-27856426 Trifolium pratense
Tp57577_TGAC_v2_gene5559 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 27851427-27856426 Trifolium pratense
Tp57577_TGAC_v2_gene5559 5.0kb downstream 5.0kb downstream 11046 true Tp57577_TGAC_v2_LG4: 27840381-27851426 Trifolium pratense
Tp57577_TGAC_v2_gene5559 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 27840381-27845380 Trifolium pratense
Tp57577_TGAC_v2_gene5559 10.0kb upstream 10.0kb upstream 16046 true Tp57577_TGAC_v2_LG4: 27845381-27861426 Trifolium pratense
Tp57577_TGAC_v2_gene5559 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 27851427-27861426 Trifolium pratense
Tp57577_TGAC_v2_gene5559 10.0kb downstream 10.0kb downstream 16046 true Tp57577_TGAC_v2_LG4: 27835381-27851426 Trifolium pratense
Tp57577_TGAC_v2_gene5559 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 27835381-27845380 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295606 5265 Fabidae View MSA
124060763 5270 Rosid View MSA
123743131 5271 Pentapetalae View MSA
122792219 5272 Eudicot View MSA
122046771 5273 Angiosperm View MSA
121351616 5274 Embryophyte View MSA
123427773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain