Gene : Tp57577_TGAC_v2_gene5570 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2995
Name:  ? Tp57577_TGAC_v2_gene5570 Secondary Identifier:  ? PAC:35964000
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5570 0.5kb upstream 0.5kb upstream 2170 true Tp57577_TGAC_v2_LG4: 27486057-27488226 Trifolium pratense
Tp57577_TGAC_v2_gene5570 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 27486057-27486556 Trifolium pratense
Tp57577_TGAC_v2_gene5570 0.5kb downstream 0.5kb downstream 2170 true Tp57577_TGAC_v2_LG4: 27486557-27488726 Trifolium pratense
Tp57577_TGAC_v2_gene5570 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 27488227-27488726 Trifolium pratense
Tp57577_TGAC_v2_gene5570 1.0kb upstream 1.0kb upstream 2670 true Tp57577_TGAC_v2_LG4: 27485557-27488226 Trifolium pratense
Tp57577_TGAC_v2_gene5570 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 27485557-27486556 Trifolium pratense
Tp57577_TGAC_v2_gene5570 1.0kb downstream 1.0kb downstream 2670 true Tp57577_TGAC_v2_LG4: 27486557-27489226 Trifolium pratense
Tp57577_TGAC_v2_gene5570 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 27488227-27489226 Trifolium pratense
Tp57577_TGAC_v2_gene5570 2.0kb upstream 2.0kb upstream 3670 true Tp57577_TGAC_v2_LG4: 27484557-27488226 Trifolium pratense
Tp57577_TGAC_v2_gene5570 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 27484557-27486556 Trifolium pratense
Tp57577_TGAC_v2_gene5570 2.0kb downstream 2.0kb downstream 3670 true Tp57577_TGAC_v2_LG4: 27486557-27490226 Trifolium pratense
Tp57577_TGAC_v2_gene5570 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 27488227-27490226 Trifolium pratense
Tp57577_TGAC_v2_gene5570 5.0kb upstream 5.0kb upstream 6670 true Tp57577_TGAC_v2_LG4: 27481557-27488226 Trifolium pratense
Tp57577_TGAC_v2_gene5570 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 27481557-27486556 Trifolium pratense
Tp57577_TGAC_v2_gene5570 5.0kb downstream 5.0kb downstream 6670 true Tp57577_TGAC_v2_LG4: 27486557-27493226 Trifolium pratense
Tp57577_TGAC_v2_gene5570 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 27488227-27493226 Trifolium pratense
Tp57577_TGAC_v2_gene5570 10.0kb upstream 10.0kb upstream 11670 true Tp57577_TGAC_v2_LG4: 27476557-27488226 Trifolium pratense
Tp57577_TGAC_v2_gene5570 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 27476557-27486556 Trifolium pratense
Tp57577_TGAC_v2_gene5570 10.0kb downstream 10.0kb downstream 11670 true Tp57577_TGAC_v2_LG4: 27486557-27498226 Trifolium pratense
Tp57577_TGAC_v2_gene5570 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 27488227-27498226 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302359 5265 Fabidae View MSA
124066946 5270 Rosid View MSA
123748514 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain