Gene : Tp57577_TGAC_v2_gene5619 T. pratense v2
Defline:  (1 of 1) PTHR22763//PTHR22763:SF40 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3056
Name:  ? Tp57577_TGAC_v2_gene5619 Secondary Identifier:  ? PAC:35963497
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5619 0.5kb upstream 0.5kb upstream 1868 true Tp57577_TGAC_v2_LG4: 28019601-28021468 Trifolium pratense
Tp57577_TGAC_v2_gene5619 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 28019601-28020100 Trifolium pratense
Tp57577_TGAC_v2_gene5619 0.5kb downstream 0.5kb downstream 1868 true Tp57577_TGAC_v2_LG4: 28020101-28021968 Trifolium pratense
Tp57577_TGAC_v2_gene5619 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 28021469-28021968 Trifolium pratense
Tp57577_TGAC_v2_gene5619 1.0kb upstream 1.0kb upstream 2368 true Tp57577_TGAC_v2_LG4: 28019101-28021468 Trifolium pratense
Tp57577_TGAC_v2_gene5619 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 28019101-28020100 Trifolium pratense
Tp57577_TGAC_v2_gene5619 1.0kb downstream 1.0kb downstream 2368 true Tp57577_TGAC_v2_LG4: 28020101-28022468 Trifolium pratense
Tp57577_TGAC_v2_gene5619 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 28021469-28022468 Trifolium pratense
Tp57577_TGAC_v2_gene5619 2.0kb upstream 2.0kb upstream 3368 true Tp57577_TGAC_v2_LG4: 28018101-28021468 Trifolium pratense
Tp57577_TGAC_v2_gene5619 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 28018101-28020100 Trifolium pratense
Tp57577_TGAC_v2_gene5619 2.0kb downstream 2.0kb downstream 3368 true Tp57577_TGAC_v2_LG4: 28020101-28023468 Trifolium pratense
Tp57577_TGAC_v2_gene5619 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 28021469-28023468 Trifolium pratense
Tp57577_TGAC_v2_gene5619 5.0kb upstream 5.0kb upstream 6368 true Tp57577_TGAC_v2_LG4: 28015101-28021468 Trifolium pratense
Tp57577_TGAC_v2_gene5619 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 28015101-28020100 Trifolium pratense
Tp57577_TGAC_v2_gene5619 5.0kb downstream 5.0kb downstream 6368 true Tp57577_TGAC_v2_LG4: 28020101-28026468 Trifolium pratense
Tp57577_TGAC_v2_gene5619 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 28021469-28026468 Trifolium pratense
Tp57577_TGAC_v2_gene5619 10.0kb upstream 10.0kb upstream 11368 true Tp57577_TGAC_v2_LG4: 28010101-28021468 Trifolium pratense
Tp57577_TGAC_v2_gene5619 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 28010101-28020100 Trifolium pratense
Tp57577_TGAC_v2_gene5619 10.0kb downstream 10.0kb downstream 11368 true Tp57577_TGAC_v2_LG4: 28020101-28031468 Trifolium pratense
Tp57577_TGAC_v2_gene5619 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 28021469-28031468 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296211 5265 Fabidae View MSA
124073026 5270 Rosid View MSA
123745848 5271 Pentapetalae View MSA
122795555 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain