Gene : Tp57577_TGAC_v2_gene5630 T. pratense v2
Defline:  (1 of 2) 2.3.1.16 - Acetyl-CoA C-acyltransferase / Beta-ketothiolase Genomic Order:  3043
Name:  ? Tp57577_TGAC_v2_gene5630 Secondary Identifier:  ? PAC:35963978
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5136 Trifolium pratense pathologic  
Tpratense PWY-561 Trifolium pratense pathologic  
Tpratense PWY-6435 Trifolium pratense pathologic  
Tpratense PWY-735 Trifolium pratense pathologic  
Tpratense PWY-7606 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5630 0.5kb upstream 0.5kb upstream 5458 true Tp57577_TGAC_v2_LG4: 27885429-27890886 Trifolium pratense
Tp57577_TGAC_v2_gene5630 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 27890387-27890886 Trifolium pratense
Tp57577_TGAC_v2_gene5630 0.5kb downstream 0.5kb downstream 5458 true Tp57577_TGAC_v2_LG4: 27884929-27890386 Trifolium pratense
Tp57577_TGAC_v2_gene5630 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 27884929-27885428 Trifolium pratense
Tp57577_TGAC_v2_gene5630 1.0kb upstream 1.0kb upstream 5958 true Tp57577_TGAC_v2_LG4: 27885429-27891386 Trifolium pratense
Tp57577_TGAC_v2_gene5630 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 27890387-27891386 Trifolium pratense
Tp57577_TGAC_v2_gene5630 1.0kb downstream 1.0kb downstream 5958 true Tp57577_TGAC_v2_LG4: 27884429-27890386 Trifolium pratense
Tp57577_TGAC_v2_gene5630 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 27884429-27885428 Trifolium pratense
Tp57577_TGAC_v2_gene5630 2.0kb upstream 2.0kb upstream 6958 true Tp57577_TGAC_v2_LG4: 27885429-27892386 Trifolium pratense
Tp57577_TGAC_v2_gene5630 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 27890387-27892386 Trifolium pratense
Tp57577_TGAC_v2_gene5630 2.0kb downstream 2.0kb downstream 6958 true Tp57577_TGAC_v2_LG4: 27883429-27890386 Trifolium pratense
Tp57577_TGAC_v2_gene5630 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 27883429-27885428 Trifolium pratense
Tp57577_TGAC_v2_gene5630 5.0kb upstream 5.0kb upstream 9958 true Tp57577_TGAC_v2_LG4: 27885429-27895386 Trifolium pratense
Tp57577_TGAC_v2_gene5630 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 27890387-27895386 Trifolium pratense
Tp57577_TGAC_v2_gene5630 5.0kb downstream 5.0kb downstream 9958 true Tp57577_TGAC_v2_LG4: 27880429-27890386 Trifolium pratense
Tp57577_TGAC_v2_gene5630 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 27880429-27885428 Trifolium pratense
Tp57577_TGAC_v2_gene5630 10.0kb upstream 10.0kb upstream 14958 true Tp57577_TGAC_v2_LG4: 27885429-27900386 Trifolium pratense
Tp57577_TGAC_v2_gene5630 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 27890387-27900386 Trifolium pratense
Tp57577_TGAC_v2_gene5630 10.0kb downstream 10.0kb downstream 14958 true Tp57577_TGAC_v2_LG4: 27875429-27890386 Trifolium pratense
Tp57577_TGAC_v2_gene5630 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 27875429-27885428 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296304 5265 Fabidae View MSA
124070477 5270 Rosid View MSA
123750766 5271 Pentapetalae View MSA
122786071 5272 Eudicot View MSA
122045703 5273 Angiosperm View MSA
121347485 5274 Embryophyte View MSA
123424542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain