Gene : Tp57577_TGAC_v2_gene9850 T. pratense v2
Defline:  (1 of 5) PTHR10366:SF425 - BRASSINOSTEROID METABOLIC PATHWAY PROTEIN BEN1 Genomic Order:  2229
Name:  ? Tp57577_TGAC_v2_gene9850 Secondary Identifier:  ? PAC:35963665
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-2229 Trifolium pratense pathologic  
Tpratense PWY-2463 Trifolium pratense pathologic  
Tpratense PWY-2464 Trifolium pratense pathologic  
Tpratense PWY-2761 Trifolium pratense pathologic  
Tpratense PWY-5717 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9850 0.5kb upstream 0.5kb upstream 3865 true Tp57577_TGAC_v2_LG4: 21053023-21056887 Trifolium pratense
Tp57577_TGAC_v2_gene9850 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 21053023-21053522 Trifolium pratense
Tp57577_TGAC_v2_gene9850 0.5kb downstream 0.5kb downstream 3865 true Tp57577_TGAC_v2_LG4: 21053523-21057387 Trifolium pratense
Tp57577_TGAC_v2_gene9850 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 21056888-21057387 Trifolium pratense
Tp57577_TGAC_v2_gene9850 1.0kb upstream 1.0kb upstream 4365 true Tp57577_TGAC_v2_LG4: 21052523-21056887 Trifolium pratense
Tp57577_TGAC_v2_gene9850 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 21052523-21053522 Trifolium pratense
Tp57577_TGAC_v2_gene9850 1.0kb downstream 1.0kb downstream 4365 true Tp57577_TGAC_v2_LG4: 21053523-21057887 Trifolium pratense
Tp57577_TGAC_v2_gene9850 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 21056888-21057887 Trifolium pratense
Tp57577_TGAC_v2_gene9850 2.0kb upstream 2.0kb upstream 5365 true Tp57577_TGAC_v2_LG4: 21051523-21056887 Trifolium pratense
Tp57577_TGAC_v2_gene9850 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 21051523-21053522 Trifolium pratense
Tp57577_TGAC_v2_gene9850 2.0kb downstream 2.0kb downstream 5365 true Tp57577_TGAC_v2_LG4: 21053523-21058887 Trifolium pratense
Tp57577_TGAC_v2_gene9850 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 21056888-21058887 Trifolium pratense
Tp57577_TGAC_v2_gene9850 5.0kb upstream 5.0kb upstream 8365 true Tp57577_TGAC_v2_LG4: 21048523-21056887 Trifolium pratense
Tp57577_TGAC_v2_gene9850 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 21048523-21053522 Trifolium pratense
Tp57577_TGAC_v2_gene9850 5.0kb downstream 5.0kb downstream 8365 true Tp57577_TGAC_v2_LG4: 21053523-21061887 Trifolium pratense
Tp57577_TGAC_v2_gene9850 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 21056888-21061887 Trifolium pratense
Tp57577_TGAC_v2_gene9850 10.0kb upstream 10.0kb upstream 13365 true Tp57577_TGAC_v2_LG4: 21043523-21056887 Trifolium pratense
Tp57577_TGAC_v2_gene9850 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 21043523-21053522 Trifolium pratense
Tp57577_TGAC_v2_gene9850 10.0kb downstream 10.0kb downstream 13365 true Tp57577_TGAC_v2_LG4: 21053523-21066887 Trifolium pratense
Tp57577_TGAC_v2_gene9850 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 21056888-21066887 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031301 5273 Angiosperm View MSA
122311531 5265 Fabidae View MSA
124066855 5270 Rosid View MSA
123745083 5271 Pentapetalae View MSA
122790638 5272 Eudicot View MSA
121300366 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain