Gene : Tp57577_TGAC_v2_gene1506 T. pratense v2
Defline:  (1 of 2) PTHR31561:SF5 - 3-KETOACYL-COA SYNTHASE 5-RELATED Genomic Order:  1553
Name:  ? Tp57577_TGAC_v2_gene1506 Secondary Identifier:  ? PAC:35984919
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5080 Trifolium pratense pathologic  
Tpratense PWY-6433 Trifolium pratense pathologic  
Tpratense PWY-6598 Trifolium pratense pathologic  
Tpratense PWY-7036 Trifolium pratense pathologic  
Tpratense PWY-7601 Trifolium pratense pathologic  
Tpratense PWY-7619 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1506 0.5kb upstream 0.5kb upstream 8768 true Tp57577_TGAC_v2_LG5: 14972934-14981701 Trifolium pratense
Tp57577_TGAC_v2_gene1506 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 14972934-14973433 Trifolium pratense
Tp57577_TGAC_v2_gene1506 0.5kb downstream 0.5kb downstream 8768 true Tp57577_TGAC_v2_LG5: 14973434-14982201 Trifolium pratense
Tp57577_TGAC_v2_gene1506 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 14981702-14982201 Trifolium pratense
Tp57577_TGAC_v2_gene1506 1.0kb upstream 1.0kb upstream 9268 true Tp57577_TGAC_v2_LG5: 14972434-14981701 Trifolium pratense
Tp57577_TGAC_v2_gene1506 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 14972434-14973433 Trifolium pratense
Tp57577_TGAC_v2_gene1506 1.0kb downstream 1.0kb downstream 9268 true Tp57577_TGAC_v2_LG5: 14973434-14982701 Trifolium pratense
Tp57577_TGAC_v2_gene1506 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 14981702-14982701 Trifolium pratense
Tp57577_TGAC_v2_gene1506 2.0kb upstream 2.0kb upstream 10268 true Tp57577_TGAC_v2_LG5: 14971434-14981701 Trifolium pratense
Tp57577_TGAC_v2_gene1506 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 14971434-14973433 Trifolium pratense
Tp57577_TGAC_v2_gene1506 2.0kb downstream 2.0kb downstream 10268 true Tp57577_TGAC_v2_LG5: 14973434-14983701 Trifolium pratense
Tp57577_TGAC_v2_gene1506 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 14981702-14983701 Trifolium pratense
Tp57577_TGAC_v2_gene1506 5.0kb upstream 5.0kb upstream 13268 true Tp57577_TGAC_v2_LG5: 14968434-14981701 Trifolium pratense
Tp57577_TGAC_v2_gene1506 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 14968434-14973433 Trifolium pratense
Tp57577_TGAC_v2_gene1506 5.0kb downstream 5.0kb downstream 13268 true Tp57577_TGAC_v2_LG5: 14973434-14986701 Trifolium pratense
Tp57577_TGAC_v2_gene1506 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 14981702-14986701 Trifolium pratense
Tp57577_TGAC_v2_gene1506 10.0kb upstream 10.0kb upstream 18268 true Tp57577_TGAC_v2_LG5: 14963434-14981701 Trifolium pratense
Tp57577_TGAC_v2_gene1506 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 14963434-14973433 Trifolium pratense
Tp57577_TGAC_v2_gene1506 10.0kb downstream 10.0kb downstream 18268 true Tp57577_TGAC_v2_LG5: 14973434-14991701 Trifolium pratense
Tp57577_TGAC_v2_gene1506 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 14981702-14991701 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308026 5265 Fabidae View MSA
124074382 5270 Rosid View MSA
123744253 5271 Pentapetalae View MSA
122788881 5272 Eudicot View MSA
122042493 5273 Angiosperm View MSA
121309978 5274 Embryophyte View MSA
123347592 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain