Gene : Tp57577_TGAC_v2_gene13563 T. pratense v2
Defline:  (1 of 2) K01696 - tryptophan synthase beta chain (trpB) Genomic Order:  1488
Name:  ? Tp57577_TGAC_v2_gene13563 Secondary Identifier:  ? PAC:35983459
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6949 Trifolium pratense pathologic  
Tpratense TRPSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13563 0.5kb upstream 0.5kb upstream 4573 true Tp57577_TGAC_v2_LG5: 14371871-14376443 Trifolium pratense
Tp57577_TGAC_v2_gene13563 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 14375944-14376443 Trifolium pratense
Tp57577_TGAC_v2_gene13563 0.5kb downstream 0.5kb downstream 4573 true Tp57577_TGAC_v2_LG5: 14371371-14375943 Trifolium pratense
Tp57577_TGAC_v2_gene13563 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 14371371-14371870 Trifolium pratense
Tp57577_TGAC_v2_gene13563 1.0kb upstream 1.0kb upstream 5073 true Tp57577_TGAC_v2_LG5: 14371871-14376943 Trifolium pratense
Tp57577_TGAC_v2_gene13563 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 14375944-14376943 Trifolium pratense
Tp57577_TGAC_v2_gene13563 1.0kb downstream 1.0kb downstream 5073 true Tp57577_TGAC_v2_LG5: 14370871-14375943 Trifolium pratense
Tp57577_TGAC_v2_gene13563 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 14370871-14371870 Trifolium pratense
Tp57577_TGAC_v2_gene13563 2.0kb upstream 2.0kb upstream 6073 true Tp57577_TGAC_v2_LG5: 14371871-14377943 Trifolium pratense
Tp57577_TGAC_v2_gene13563 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 14375944-14377943 Trifolium pratense
Tp57577_TGAC_v2_gene13563 2.0kb downstream 2.0kb downstream 6073 true Tp57577_TGAC_v2_LG5: 14369871-14375943 Trifolium pratense
Tp57577_TGAC_v2_gene13563 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 14369871-14371870 Trifolium pratense
Tp57577_TGAC_v2_gene13563 5.0kb upstream 5.0kb upstream 9073 true Tp57577_TGAC_v2_LG5: 14371871-14380943 Trifolium pratense
Tp57577_TGAC_v2_gene13563 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 14375944-14380943 Trifolium pratense
Tp57577_TGAC_v2_gene13563 5.0kb downstream 5.0kb downstream 9073 true Tp57577_TGAC_v2_LG5: 14366871-14375943 Trifolium pratense
Tp57577_TGAC_v2_gene13563 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 14366871-14371870 Trifolium pratense
Tp57577_TGAC_v2_gene13563 10.0kb upstream 10.0kb upstream 14073 true Tp57577_TGAC_v2_LG5: 14371871-14385943 Trifolium pratense
Tp57577_TGAC_v2_gene13563 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 14375944-14385943 Trifolium pratense
Tp57577_TGAC_v2_gene13563 10.0kb downstream 10.0kb downstream 14073 true Tp57577_TGAC_v2_LG5: 14361871-14375943 Trifolium pratense
Tp57577_TGAC_v2_gene13563 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 14361871-14371870 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304210 5265 Fabidae View MSA
124062384 5270 Rosid View MSA
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain