Gene : Tp57577_TGAC_v2_gene10042 T. pratense v2
Defline:  (1 of 1) 1.1.1.35//4.2.1.17//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase Genomic Order:  286
Name:  ? Tp57577_TGAC_v2_gene10042 Secondary Identifier:  ? PAC:35983398
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ILEUDEG-PWY Trifolium pratense pathologic  
Tpratense PWY-5136 Trifolium pratense pathologic  
Tpratense PWY-5137 Trifolium pratense pathologic  
Tpratense PWY-5138 Trifolium pratense pathologic  
Tpratense PWY-561 Trifolium pratense pathologic  
Tpratense PWY-6435 Trifolium pratense pathologic  
Tpratense PWY-6837 Trifolium pratense pathologic  
Tpratense PWY-7036 Trifolium pratense pathologic  
Tpratense PWY-735 Trifolium pratense pathologic  
Tpratense PWY-7606 Trifolium pratense pathologic  
Tpratense VALDEG-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene10042 0.5kb upstream 0.5kb upstream 7696 true Tp57577_TGAC_v2_LG5: 2971961-2979656 Trifolium pratense
Tp57577_TGAC_v2_gene10042 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 2971961-2972460 Trifolium pratense
Tp57577_TGAC_v2_gene10042 0.5kb downstream 0.5kb downstream 7696 true Tp57577_TGAC_v2_LG5: 2972461-2980156 Trifolium pratense
Tp57577_TGAC_v2_gene10042 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 2979657-2980156 Trifolium pratense
Tp57577_TGAC_v2_gene10042 1.0kb upstream 1.0kb upstream 8196 true Tp57577_TGAC_v2_LG5: 2971461-2979656 Trifolium pratense
Tp57577_TGAC_v2_gene10042 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 2971461-2972460 Trifolium pratense
Tp57577_TGAC_v2_gene10042 1.0kb downstream 1.0kb downstream 8196 true Tp57577_TGAC_v2_LG5: 2972461-2980656 Trifolium pratense
Tp57577_TGAC_v2_gene10042 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 2979657-2980656 Trifolium pratense
Tp57577_TGAC_v2_gene10042 2.0kb upstream 2.0kb upstream 9196 true Tp57577_TGAC_v2_LG5: 2970461-2979656 Trifolium pratense
Tp57577_TGAC_v2_gene10042 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 2970461-2972460 Trifolium pratense
Tp57577_TGAC_v2_gene10042 2.0kb downstream 2.0kb downstream 9196 true Tp57577_TGAC_v2_LG5: 2972461-2981656 Trifolium pratense
Tp57577_TGAC_v2_gene10042 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 2979657-2981656 Trifolium pratense
Tp57577_TGAC_v2_gene10042 5.0kb upstream 5.0kb upstream 12196 true Tp57577_TGAC_v2_LG5: 2967461-2979656 Trifolium pratense
Tp57577_TGAC_v2_gene10042 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 2967461-2972460 Trifolium pratense
Tp57577_TGAC_v2_gene10042 5.0kb downstream 5.0kb downstream 12196 true Tp57577_TGAC_v2_LG5: 2972461-2984656 Trifolium pratense
Tp57577_TGAC_v2_gene10042 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 2979657-2984656 Trifolium pratense
Tp57577_TGAC_v2_gene10042 10.0kb upstream 10.0kb upstream 17196 true Tp57577_TGAC_v2_LG5: 2962461-2979656 Trifolium pratense
Tp57577_TGAC_v2_gene10042 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 2962461-2972460 Trifolium pratense
Tp57577_TGAC_v2_gene10042 10.0kb downstream 10.0kb downstream 17196 true Tp57577_TGAC_v2_LG5: 2972461-2989656 Trifolium pratense
Tp57577_TGAC_v2_gene10042 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 2979657-2989656 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300955 5265 Fabidae View MSA
124067540 5270 Rosid View MSA
123736586 5271 Pentapetalae View MSA
122787212 5272 Eudicot View MSA
122047578 5273 Angiosperm View MSA
121310763 5274 Embryophyte View MSA
123348170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain