Gene : Tp57577_TGAC_v2_gene16672 T. pratense v2
Defline:  (1 of 1) PTHR11200:SF122 - PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED Genomic Order:  1294
Name:  ? Tp57577_TGAC_v2_gene16672 Secondary Identifier:  ? PAC:35984798
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16672 0.5kb upstream 0.5kb upstream 17572 true Tp57577_TGAC_v2_LG5: 12538187-12555758 Trifolium pratense
Tp57577_TGAC_v2_gene16672 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 12555259-12555758 Trifolium pratense
Tp57577_TGAC_v2_gene16672 0.5kb downstream 0.5kb downstream 17572 true Tp57577_TGAC_v2_LG5: 12537687-12555258 Trifolium pratense
Tp57577_TGAC_v2_gene16672 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 12537687-12538186 Trifolium pratense
Tp57577_TGAC_v2_gene16672 1.0kb upstream 1.0kb upstream 18072 true Tp57577_TGAC_v2_LG5: 12538187-12556258 Trifolium pratense
Tp57577_TGAC_v2_gene16672 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 12555259-12556258 Trifolium pratense
Tp57577_TGAC_v2_gene16672 1.0kb downstream 1.0kb downstream 18072 true Tp57577_TGAC_v2_LG5: 12537187-12555258 Trifolium pratense
Tp57577_TGAC_v2_gene16672 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 12537187-12538186 Trifolium pratense
Tp57577_TGAC_v2_gene16672 2.0kb upstream 2.0kb upstream 19072 true Tp57577_TGAC_v2_LG5: 12538187-12557258 Trifolium pratense
Tp57577_TGAC_v2_gene16672 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 12555259-12557258 Trifolium pratense
Tp57577_TGAC_v2_gene16672 2.0kb downstream 2.0kb downstream 19072 true Tp57577_TGAC_v2_LG5: 12536187-12555258 Trifolium pratense
Tp57577_TGAC_v2_gene16672 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 12536187-12538186 Trifolium pratense
Tp57577_TGAC_v2_gene16672 5.0kb upstream 5.0kb upstream 22072 true Tp57577_TGAC_v2_LG5: 12538187-12560258 Trifolium pratense
Tp57577_TGAC_v2_gene16672 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 12555259-12560258 Trifolium pratense
Tp57577_TGAC_v2_gene16672 5.0kb downstream 5.0kb downstream 22072 true Tp57577_TGAC_v2_LG5: 12533187-12555258 Trifolium pratense
Tp57577_TGAC_v2_gene16672 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 12533187-12538186 Trifolium pratense
Tp57577_TGAC_v2_gene16672 10.0kb upstream 10.0kb upstream 27072 true Tp57577_TGAC_v2_LG5: 12538187-12565258 Trifolium pratense
Tp57577_TGAC_v2_gene16672 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 12555259-12565258 Trifolium pratense
Tp57577_TGAC_v2_gene16672 10.0kb downstream 10.0kb downstream 27072 true Tp57577_TGAC_v2_LG5: 12528187-12555258 Trifolium pratense
Tp57577_TGAC_v2_gene16672 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 12528187-12538186 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041370 5273 Angiosperm View MSA
122316085 5265 Fabidae View MSA
124064619 5270 Rosid View MSA
123750284 5271 Pentapetalae View MSA
122786503 5272 Eudicot View MSA
121350498 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain