Gene : Tp57577_TGAC_v2_gene17378 T. pratense v2
Defline:  (1 of 1) PTHR10210:SF58 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 5, CHLOROPLASTIC Genomic Order:  1413
Name:  ? Tp57577_TGAC_v2_gene17378 Secondary Identifier:  ? PAC:35984229
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY0-662 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17378 0.5kb upstream 0.5kb upstream 5912 true Tp57577_TGAC_v2_LG5: 13629147-13635058 Trifolium pratense
Tp57577_TGAC_v2_gene17378 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 13629147-13629646 Trifolium pratense
Tp57577_TGAC_v2_gene17378 0.5kb downstream 0.5kb downstream 5912 true Tp57577_TGAC_v2_LG5: 13629647-13635558 Trifolium pratense
Tp57577_TGAC_v2_gene17378 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 13635059-13635558 Trifolium pratense
Tp57577_TGAC_v2_gene17378 1.0kb upstream 1.0kb upstream 6412 true Tp57577_TGAC_v2_LG5: 13628647-13635058 Trifolium pratense
Tp57577_TGAC_v2_gene17378 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 13628647-13629646 Trifolium pratense
Tp57577_TGAC_v2_gene17378 1.0kb downstream 1.0kb downstream 6412 true Tp57577_TGAC_v2_LG5: 13629647-13636058 Trifolium pratense
Tp57577_TGAC_v2_gene17378 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 13635059-13636058 Trifolium pratense
Tp57577_TGAC_v2_gene17378 2.0kb upstream 2.0kb upstream 7412 true Tp57577_TGAC_v2_LG5: 13627647-13635058 Trifolium pratense
Tp57577_TGAC_v2_gene17378 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 13627647-13629646 Trifolium pratense
Tp57577_TGAC_v2_gene17378 2.0kb downstream 2.0kb downstream 7412 true Tp57577_TGAC_v2_LG5: 13629647-13637058 Trifolium pratense
Tp57577_TGAC_v2_gene17378 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 13635059-13637058 Trifolium pratense
Tp57577_TGAC_v2_gene17378 5.0kb upstream 5.0kb upstream 10412 true Tp57577_TGAC_v2_LG5: 13624647-13635058 Trifolium pratense
Tp57577_TGAC_v2_gene17378 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 13624647-13629646 Trifolium pratense
Tp57577_TGAC_v2_gene17378 5.0kb downstream 5.0kb downstream 10412 true Tp57577_TGAC_v2_LG5: 13629647-13640058 Trifolium pratense
Tp57577_TGAC_v2_gene17378 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 13635059-13640058 Trifolium pratense
Tp57577_TGAC_v2_gene17378 10.0kb upstream 10.0kb upstream 15412 true Tp57577_TGAC_v2_LG5: 13619647-13635058 Trifolium pratense
Tp57577_TGAC_v2_gene17378 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 13619647-13629646 Trifolium pratense
Tp57577_TGAC_v2_gene17378 10.0kb downstream 10.0kb downstream 15412 true Tp57577_TGAC_v2_LG5: 13629647-13645058 Trifolium pratense
Tp57577_TGAC_v2_gene17378 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 13635059-13645058 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304636 5265 Fabidae View MSA
124060795 5270 Rosid View MSA
123749025 5271 Pentapetalae View MSA
122788028 5272 Eudicot View MSA
122042217 5273 Angiosperm View MSA
121347994 5274 Embryophyte View MSA
123427852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain