Gene : Tp57577_TGAC_v2_gene17355 T. pratense v2
Defline:  (1 of 2) K01885 - glutamyl-tRNA synthetase (EARS, gltX) Genomic Order:  1402
Name:  ? Tp57577_TGAC_v2_gene17355 Secondary Identifier:  ? PAC:35984515
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5188 Trifolium pratense pathologic  
Tpratense PWY-5918 Trifolium pratense pathologic  
Tpratense TRNA-CHARGING-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17355 0.5kb upstream 0.5kb upstream 5293 true Tp57577_TGAC_v2_LG5: 13535347-13540639 Trifolium pratense
Tp57577_TGAC_v2_gene17355 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 13540140-13540639 Trifolium pratense
Tp57577_TGAC_v2_gene17355 0.5kb downstream 0.5kb downstream 5293 true Tp57577_TGAC_v2_LG5: 13534847-13540139 Trifolium pratense
Tp57577_TGAC_v2_gene17355 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 13534847-13535346 Trifolium pratense
Tp57577_TGAC_v2_gene17355 1.0kb upstream 1.0kb upstream 5793 true Tp57577_TGAC_v2_LG5: 13535347-13541139 Trifolium pratense
Tp57577_TGAC_v2_gene17355 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 13540140-13541139 Trifolium pratense
Tp57577_TGAC_v2_gene17355 1.0kb downstream 1.0kb downstream 5793 true Tp57577_TGAC_v2_LG5: 13534347-13540139 Trifolium pratense
Tp57577_TGAC_v2_gene17355 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 13534347-13535346 Trifolium pratense
Tp57577_TGAC_v2_gene17355 2.0kb upstream 2.0kb upstream 6793 true Tp57577_TGAC_v2_LG5: 13535347-13542139 Trifolium pratense
Tp57577_TGAC_v2_gene17355 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 13540140-13542139 Trifolium pratense
Tp57577_TGAC_v2_gene17355 2.0kb downstream 2.0kb downstream 6793 true Tp57577_TGAC_v2_LG5: 13533347-13540139 Trifolium pratense
Tp57577_TGAC_v2_gene17355 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 13533347-13535346 Trifolium pratense
Tp57577_TGAC_v2_gene17355 5.0kb upstream 5.0kb upstream 9793 true Tp57577_TGAC_v2_LG5: 13535347-13545139 Trifolium pratense
Tp57577_TGAC_v2_gene17355 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 13540140-13545139 Trifolium pratense
Tp57577_TGAC_v2_gene17355 5.0kb downstream 5.0kb downstream 9793 true Tp57577_TGAC_v2_LG5: 13530347-13540139 Trifolium pratense
Tp57577_TGAC_v2_gene17355 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 13530347-13535346 Trifolium pratense
Tp57577_TGAC_v2_gene17355 10.0kb upstream 10.0kb upstream 14793 true Tp57577_TGAC_v2_LG5: 13535347-13550139 Trifolium pratense
Tp57577_TGAC_v2_gene17355 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 13540140-13550139 Trifolium pratense
Tp57577_TGAC_v2_gene17355 10.0kb downstream 10.0kb downstream 14793 true Tp57577_TGAC_v2_LG5: 13525347-13540139 Trifolium pratense
Tp57577_TGAC_v2_gene17355 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 13525347-13535346 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301417 5265 Fabidae View MSA
124063360 5270 Rosid View MSA
123737264 5271 Pentapetalae View MSA
122787973 5272 Eudicot View MSA
122041760 5273 Angiosperm View MSA
121345245 5274 Embryophyte View MSA
123424323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain