Gene : Tp57577_TGAC_v2_gene19841 T. pratense v2
Defline:  (1 of 2) K00161 - pyruvate dehydrogenase E1 component alpha subunit (PDHA, pdhA) Genomic Order:  478
Name:  ? Tp57577_TGAC_v2_gene19841 Secondary Identifier:  ? PAC:35984744
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5173 Trifolium pratense pathologic  
Tpratense PWY-5464 Trifolium pratense pathologic  
Tpratense PYRUVDEHYD-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19841 0.5kb upstream 0.5kb upstream 5133 true Tp57577_TGAC_v2_LG5: 4852395-4857527 Trifolium pratense
Tp57577_TGAC_v2_gene19841 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 4852395-4852894 Trifolium pratense
Tp57577_TGAC_v2_gene19841 0.5kb downstream 0.5kb downstream 5133 true Tp57577_TGAC_v2_LG5: 4852895-4858027 Trifolium pratense
Tp57577_TGAC_v2_gene19841 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 4857528-4858027 Trifolium pratense
Tp57577_TGAC_v2_gene19841 1.0kb upstream 1.0kb upstream 5633 true Tp57577_TGAC_v2_LG5: 4851895-4857527 Trifolium pratense
Tp57577_TGAC_v2_gene19841 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 4851895-4852894 Trifolium pratense
Tp57577_TGAC_v2_gene19841 1.0kb downstream 1.0kb downstream 5633 true Tp57577_TGAC_v2_LG5: 4852895-4858527 Trifolium pratense
Tp57577_TGAC_v2_gene19841 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 4857528-4858527 Trifolium pratense
Tp57577_TGAC_v2_gene19841 2.0kb upstream 2.0kb upstream 6633 true Tp57577_TGAC_v2_LG5: 4850895-4857527 Trifolium pratense
Tp57577_TGAC_v2_gene19841 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 4850895-4852894 Trifolium pratense
Tp57577_TGAC_v2_gene19841 2.0kb downstream 2.0kb downstream 6633 true Tp57577_TGAC_v2_LG5: 4852895-4859527 Trifolium pratense
Tp57577_TGAC_v2_gene19841 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 4857528-4859527 Trifolium pratense
Tp57577_TGAC_v2_gene19841 5.0kb upstream 5.0kb upstream 9633 true Tp57577_TGAC_v2_LG5: 4847895-4857527 Trifolium pratense
Tp57577_TGAC_v2_gene19841 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 4847895-4852894 Trifolium pratense
Tp57577_TGAC_v2_gene19841 5.0kb downstream 5.0kb downstream 9633 true Tp57577_TGAC_v2_LG5: 4852895-4862527 Trifolium pratense
Tp57577_TGAC_v2_gene19841 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 4857528-4862527 Trifolium pratense
Tp57577_TGAC_v2_gene19841 10.0kb upstream 10.0kb upstream 14633 true Tp57577_TGAC_v2_LG5: 4842895-4857527 Trifolium pratense
Tp57577_TGAC_v2_gene19841 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 4842895-4852894 Trifolium pratense
Tp57577_TGAC_v2_gene19841 10.0kb downstream 10.0kb downstream 14633 true Tp57577_TGAC_v2_LG5: 4852895-4867527 Trifolium pratense
Tp57577_TGAC_v2_gene19841 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 4857528-4867527 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309169 5265 Fabidae View MSA
124066481 5270 Rosid View MSA
123745685 5271 Pentapetalae View MSA
122791580 5272 Eudicot View MSA
122044804 5273 Angiosperm View MSA
121347425 5274 Embryophyte View MSA
123423942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain