Gene : Tp57577_TGAC_v2_gene2014 T. pratense v2
Defline:  (1 of 2) PTHR14363:SF17 - HEPARANASE-LIKE PROTEIN 1-RELATED Genomic Order:  418
Name:  ? Tp57577_TGAC_v2_gene2014 Secondary Identifier:  ? PAC:35984472
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7213 Trifolium pratense pathologic  
Tpratense PWY-7214 Trifolium pratense pathologic  
Tpratense PWY-7445 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2014 0.5kb upstream 0.5kb upstream 5475 true Tp57577_TGAC_v2_LG5: 4249857-4255331 Trifolium pratense
Tp57577_TGAC_v2_gene2014 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 4254832-4255331 Trifolium pratense
Tp57577_TGAC_v2_gene2014 0.5kb downstream 0.5kb downstream 5475 true Tp57577_TGAC_v2_LG5: 4249357-4254831 Trifolium pratense
Tp57577_TGAC_v2_gene2014 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 4249357-4249856 Trifolium pratense
Tp57577_TGAC_v2_gene2014 1.0kb upstream 1.0kb upstream 5975 true Tp57577_TGAC_v2_LG5: 4249857-4255831 Trifolium pratense
Tp57577_TGAC_v2_gene2014 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 4254832-4255831 Trifolium pratense
Tp57577_TGAC_v2_gene2014 1.0kb downstream 1.0kb downstream 5975 true Tp57577_TGAC_v2_LG5: 4248857-4254831 Trifolium pratense
Tp57577_TGAC_v2_gene2014 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 4248857-4249856 Trifolium pratense
Tp57577_TGAC_v2_gene2014 2.0kb upstream 2.0kb upstream 6975 true Tp57577_TGAC_v2_LG5: 4249857-4256831 Trifolium pratense
Tp57577_TGAC_v2_gene2014 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 4254832-4256831 Trifolium pratense
Tp57577_TGAC_v2_gene2014 2.0kb downstream 2.0kb downstream 6975 true Tp57577_TGAC_v2_LG5: 4247857-4254831 Trifolium pratense
Tp57577_TGAC_v2_gene2014 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 4247857-4249856 Trifolium pratense
Tp57577_TGAC_v2_gene2014 5.0kb upstream 5.0kb upstream 9975 true Tp57577_TGAC_v2_LG5: 4249857-4259831 Trifolium pratense
Tp57577_TGAC_v2_gene2014 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 4254832-4259831 Trifolium pratense
Tp57577_TGAC_v2_gene2014 5.0kb downstream 5.0kb downstream 9975 true Tp57577_TGAC_v2_LG5: 4244857-4254831 Trifolium pratense
Tp57577_TGAC_v2_gene2014 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 4244857-4249856 Trifolium pratense
Tp57577_TGAC_v2_gene2014 10.0kb upstream 10.0kb upstream 14975 true Tp57577_TGAC_v2_LG5: 4249857-4264831 Trifolium pratense
Tp57577_TGAC_v2_gene2014 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 4254832-4264831 Trifolium pratense
Tp57577_TGAC_v2_gene2014 10.0kb downstream 10.0kb downstream 14975 true Tp57577_TGAC_v2_LG5: 4239857-4254831 Trifolium pratense
Tp57577_TGAC_v2_gene2014 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 4239857-4249856 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311990 5265 Fabidae View MSA
124070666 5270 Rosid View MSA
123745187 5271 Pentapetalae View MSA
122795641 5272 Eudicot View MSA
122049598 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain